RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 NEUROG2Q9H2A3 272 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 HACD3Q9P035 362 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 EFCAB14O75071 495 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 WEE2P0C1S8 567 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 DDX5P17844 614 aaKnown RBP17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 SNRNP27Q8WVK2 155 aaKnown RBP17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 C2orf40Q9H1Z8 148 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 TRIM49P0CI25 452 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 TRIM49CP0CI26 452 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 NPEPPSP55786 919 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 GRIN1Q05586 938 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 RUNX1T1Q06455 604 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 CEP95Q96GE4 821 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 EIF2AK1Q9BQI3 630 aaKnown RBP17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 FRMD8P1Q9BZ68 369 aaPredicted RBP17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 PCMTD2Q9NV79 361 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 KCND2Q9NZV8 630 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 MPP6Q9NZW5 540 aa17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.95■□□□□ 0.46
COL4A3BP-203ENST00000380494 GSG1L2A8MUP6 293 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 GADL1Q6ZQY3 521 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 NLRP9Q7RTR0 991 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 SH3RF3Q8TEJ3 882 aaPredicted RBP17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 FAM210AQ96ND0 272 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 ZBTB1Q9Y2K1 713 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 MYO3BQ8WXR4 1341 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 NEO1Q92859 1461 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 NLRP1Q9C000 1473 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 KCNN4O15554 427 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 FSBPO95073 299 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 PTPN4P29074 926 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 ACTR2P61160 394 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 KBTBD12Q3ZCT8 623 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 SLC27A3Q5K4L6 730 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 FUCA2Q9BTY2 467 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 PAK5Q9P286 719 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 HERC5Q9UII4 1024 aaKnown RBP17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 LOC102724428A0A0B4J2F2 783 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 AIM2O14862 343 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 PDHBP11177 359 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 QARSP47897 775 aaKnown RBP17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 SIK1P57059 783 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 ARHGAP22Q7Z5H3 698 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 SCUBE1Q8IWY4 988 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 KCTD17Q8N5Z5 321 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 ACTRT1Q8TDG2 376 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 CASP10Q92851 521 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 CLMNQ96JQ2 1002 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 WHRNQ9P202 907 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 LRRC7Q96NW7 1537 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 GOLGA8TH3BQL2 631 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 P4HA2O15460 535 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 GUCY1A2P33402 732 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 ERVK-24P63145 666 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 PPIL6Q8IXY8 311 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 FLAD1Q8NFF5 587 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 CELF4Q9BZC1 486 aaKnown RBP17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 VPS33BQ9H267 617 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 VCAM1P19320 739 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 MAPK7Q13164 816 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 MAPK6Q16659 721 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 KYAT1Q16773 422 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 CATSPER2Q96P56 530 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 RUBCNLQ9H714 662 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 MAD2L2Q9UI95 211 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 UTYO14607 1347 aa17.94■□□□□ 0.46
COL4A3BP-203ENST00000380494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.93■□□□□ 0.461e-6■■■■■ 42.9
COL4A3BP-203ENST00000380494 KCNA2P16389 499 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 SNRPFP62306 86 aaKnown RBP17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 PLOD1Q02809 727 aaPredicted RBP17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 DMC1Q14565 340 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 FAM102AQ5T9C2 384 aaPredicted RBP17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 DDX42Q86XP3 938 aaKnown RBP eCLIP17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 TPCN2Q8NHX9 752 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 DCP1AQ9NPI6 582 aaPredicted RBP17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 ITGB1BP2Q9UKP3 347 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 TRIM69Q86WT6 500 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 ZNF677Q86XU0 584 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 FAM192AQ9GZU8 254 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 NRKQ7Z2Y5 1582 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 ZNF609O15014 1411 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 PACS2Q86VP3 889 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 HAO1Q9UJM8 370 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 TRPC5OSA6NMA1 111 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 A8MXQ7 604 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 E5RI56 91 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 PSMC3P17980 439 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 COMTP21964 271 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 CCDC85BQ15834 202 aaPredicted RBP17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 C3orf62Q6ZUJ4 267 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 AGR3Q8TD06 166 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 TRIM62Q9BVG3 475 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 KCND1Q9NSA2 647 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 CDC42BPGQ6DT37 1551 aa17.93■□□□□ 0.46
COL4A3BP-203ENST00000380494 CROCC2H7BZ55 1655 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 SPRP35270 261 aaPredicted RBP17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 PRKG1Q13976 671 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 CHI3L2Q15782 390 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 FIGNQ5HY92 759 aa17.92■□□□□ 0.46
COL4A3BP-203ENST00000380494 RBBP8NLQ8NC74 664 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms