RNA–Protein interactions for RNA: ENST00000378746.8

KIF3A-202, Transcript of kinesin family member 3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene KIF3A, Length 6,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-202ENST00000378746 RPA1P27694 616 aa16.49■□□□□ 0.23
KIF3A-202ENST00000378746 COPB2P35606 906 aa16.49■□□□□ 0.23
KIF3A-202ENST00000378746 VHLP40337 213 aa16.49■□□□□ 0.23
KIF3A-202ENST00000378746 LRRC8EQ6NSJ5 796 aa16.49■□□□□ 0.23
KIF3A-202ENST00000378746 RAPGEF5Q92565 580 aa16.49■□□□□ 0.23
KIF3A-202ENST00000378746 TMEM247A6NEH6 219 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 KCNQ4P56696 695 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 ACTR2P61160 394 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 CDKAL1Q5VV42 579 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 KDM4CQ9H3R0 1056 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 CCDC134Q9H6E4 229 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 KCND1Q9NSA2 647 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 FAM217BQ9NTX9 383 aaPredicted RBP16.48■□□□□ 0.23
KIF3A-202ENST00000378746 SNRNP35Q16560 246 aaKnown RBP16.48■□□□□ 0.23
KIF3A-202ENST00000378746 LDHDQ86WU2 507 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 TDRD3Q9H7E2 651 aaKnown RBP16.48■□□□□ 0.23
KIF3A-202ENST00000378746 LOC102724159A0A0B4J2E5 919 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 KCNN4O15554 427 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 GNAT1P11488 350 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 PTK7Q13308 1070 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 PWP2Q15269 919 aaKnown RBP16.48■□□□□ 0.23
KIF3A-202ENST00000378746 UGP2Q16851 508 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 ZNF560Q96MR9 790 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 ASPSCR1Q9BZE9 553 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 NBPF3Q9H094 633 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 TMEM117Q9H0C3 514 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 ACAD9Q9H845 621 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 PDP2Q9P2J9 529 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 KRT16P08779 473 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 SNRPAP09012 282 aaKnown RBP16.48■□□□□ 0.23
KIF3A-202ENST00000378746 SERPINB10P48595 397 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 POU5F1BQ06416 359 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 C9orf72Q96LT7 481 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 LRFN2Q9ULH4 789 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 A0A0A6YYK5 440 aaPredicted RBP16.48■□□□□ 0.23
KIF3A-202ENST00000378746 IFNA8P32881 189 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 PKD2L2Q9NZM6 624 aa16.48■□□□□ 0.23
KIF3A-202ENST00000378746 KCNA4P22459 653 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 MAPK7Q13164 816 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 SLC29A2Q14542 456 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 ZSWIM1Q9BR11 485 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 PPME1Q9Y570 386 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 LRRIQ3A6PVS8 624 aaPredicted RBP16.47■□□□□ 0.23
KIF3A-202ENST00000378746 NSUN2Q08J23 767 aaKnown RBP eCLIP16.47■□□□□ 0.23
KIF3A-202ENST00000378746 C4orf33Q8N1A6 199 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 MANSC1Q9H8J5 431 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 GTF3C4Q9UKN8 822 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 TMEM259Q4ZIN3 620 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 FASTKD1Q53R41 847 aaKnown RBP16.47■□□□□ 0.23
KIF3A-202ENST00000378746 KCNV1Q6PIU1 500 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 SLC13A5Q86YT5 568 aaPredicted RBP16.47■□□□□ 0.23
KIF3A-202ENST00000378746 FBXL16Q8N461 479 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 PPP1R2P1Q96PQ5 205 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 PPP1R16BQ96T49 567 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 SENP2Q9HC62 589 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 SLC13A4Q9UKG4 626 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 PPRC1Q5VV67 1664 aaKnown RBP16.47■□□□□ 0.23
KIF3A-202ENST00000378746 KDM6AO15550 1401 aaPredicted RBP16.47■□□□□ 0.23
KIF3A-202ENST00000378746 TSPY1Q01534 308 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 SGSM1Q2NKQ1 1148 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 RBBP8NLQ8NC74 664 aaPredicted RBP16.47■□□□□ 0.23
KIF3A-202ENST00000378746 CELF4Q9BZC1 486 aaKnown RBP16.47■□□□□ 0.23
KIF3A-202ENST00000378746 HSPA13P48723 471 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 IMPG1Q17R60 797 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 PRUNE1Q86TP1 453 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 PPIL6Q8IXY8 311 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 MAGEB18Q96M61 343 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 RAB21Q9UL25 225 aa16.47■□□□□ 0.23
KIF3A-202ENST00000378746 SALL3Q9BXA9 1300 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 ANP32DO95626 131 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 KRT4P19013 534 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 GEMIN4P57678 1058 aaKnown RBP16.46■□□□□ 0.23
KIF3A-202ENST00000378746 CRYMQ14894 314 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 XKR3Q5GH77 459 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 DDX42Q86XP3 938 aaKnown RBP eCLIP16.46■□□□□ 0.23
KIF3A-202ENST00000378746 PPHLN1Q8NEY8 458 aaKnown RBP16.46■□□□□ 0.23
KIF3A-202ENST00000378746 SLC30A5Q8TAD4 765 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 CPA5Q8WXQ8 436 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 RSAD1Q9HA92 442 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 KIF9Q9HAQ2 790 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 ALG13Q9NP73 1137 aaKnown RBP16.46■□□□□ 0.23
KIF3A-202ENST00000378746 PSTPIP1O43586 416 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 NQO1P15559 274 aaKnown RBP16.46■□□□□ 0.23
KIF3A-202ENST00000378746 GRIN1Q05586 938 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 LVRNQ6Q4G3 990 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 ANKRD27Q96NW4 1050 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 WHRNQ9P202 907 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 ZNF212Q9UDV6 495 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 CD44P16070 742 aaKnown RBP16.46■□□□□ 0.23
KIF3A-202ENST00000378746 RANBP1P43487 201 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 LRRC34Q8IZ02 419 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 RIT2Q99578 217 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 TMCC1O94876 653 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 RASA1P20936 1047 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 HERVK_113P62684 666 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 TTLL4Q14679 1199 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 TTLL6Q8N841 843 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 OR9Q1Q8NGQ5 310 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 DTX3LQ8TDB6 740 aa16.46■□□□□ 0.23
KIF3A-202ENST00000378746 SLC8A2Q9UPR5 921 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms