RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 DLX2Q07687 328 aaPredicted RBP22.29■■□□□ 1.16
TRIM13-203ENST00000378183 KCNC3Q14003 757 aa22.29■■□□□ 1.16
TRIM13-203ENST00000378183 BRSK2Q8IWQ3 736 aa22.29■■□□□ 1.16
TRIM13-203ENST00000378183 ELOA2Q8IYF1 753 aaPredicted RBP22.29■■□□□ 1.16
TRIM13-203ENST00000378183 SPATA20Q8TB22 786 aa22.29■■□□□ 1.16
TRIM13-203ENST00000378183 CCDC47Q96A33 483 aaKnown RBP22.29■■□□□ 1.16
TRIM13-203ENST00000378183 KCTD10Q9H3F6 313 aa22.29■■□□□ 1.16
TRIM13-203ENST00000378183 CLDND1Q9NY35 253 aa22.29■■□□□ 1.16
TRIM13-203ENST00000378183 DERAQ9Y315 318 aa22.29■■□□□ 1.16
TRIM13-203ENST00000378183 SF3B1O75533 1304 aaKnown RBP eCLIP22.29■■□□□ 1.16
TRIM13-203ENST00000378183 C2CD2LO14523 706 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 KIAA0391O15091 583 aaKnown RBP22.28■■□□□ 1.16
TRIM13-203ENST00000378183 CLASP2O75122 1294 aaKnown RBP22.28■■□□□ 1.16
TRIM13-203ENST00000378183 LRPAP1P30533 357 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 CA8P35219 290 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 BRCC3P46736 316 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 GLUD2P49448 558 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 BMS1Q14692 1282 aaKnown RBP22.28■■□□□ 1.16
TRIM13-203ENST00000378183 USP41Q3LFD5 358 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 SPATA1Q5VX52 437 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 CBWD2Q8IUF1 395 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 C12orf56Q8IXR9 622 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 EFCAB13Q8IY85 973 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 FBXL18Q96ME1 805 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 CDCA3Q99618 268 aaPredicted RBP22.28■■□□□ 1.16
TRIM13-203ENST00000378183 MRPL17Q9NRX2 175 aaKnown RBP22.28■■□□□ 1.16
TRIM13-203ENST00000378183 RBAKQ9NYW8 714 aaPredicted RBP22.28■■□□□ 1.16
TRIM13-203ENST00000378183 PCDHA5Q9Y5H7 936 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 PLXNA3P51805 1871 aa22.28■■□□□ 1.16
TRIM13-203ENST00000378183 I3L4J1 428 aa22.27■■□□□ 1.16
TRIM13-203ENST00000378183 TBX10O75333 385 aa22.27■■□□□ 1.16
TRIM13-203ENST00000378183 IL18RAPO95256 599 aa22.27■■□□□ 1.16
TRIM13-203ENST00000378183 URODP06132 367 aa22.27■■□□□ 1.16
TRIM13-203ENST00000378183 CNPP09543 421 aaKnown RBP22.27■■□□□ 1.16
TRIM13-203ENST00000378183 TMEM132DQ14C87 1099 aa22.27■■□□□ 1.16
TRIM13-203ENST00000378183 RTP2Q5QGT7 225 aa22.27■■□□□ 1.16
TRIM13-203ENST00000378183 FAM171A1Q5VUB5 890 aa22.27■■□□□ 1.16
TRIM13-203ENST00000378183 HS2ST1Q7LGA3 356 aa22.27■■□□□ 1.16
TRIM13-203ENST00000378183 NOC3LQ8WTT2 800 aaKnown RBP22.27■■□□□ 1.16
TRIM13-203ENST00000378183 KLHL5Q96PQ7 755 aa22.27■■□□□ 1.16
TRIM13-203ENST00000378183 CGNQ9P2M7 1197 aaKnown RBP22.27■■□□□ 1.16
TRIM13-203ENST00000378183 MAPK8IP1Q9UQF2 711 aa22.27■■□□□ 1.16
TRIM13-203ENST00000378183 C2CD2Q9Y426 696 aa22.27■■□□□ 1.16
TRIM13-203ENST00000378183 SCN1AP35498 2009 aa22.26■■□□□ 1.15
TRIM13-203ENST00000378183 KINO60870 393 aaKnown RBP22.26■■□□□ 1.15
TRIM13-203ENST00000378183 KCNA5P22460 613 aa22.26■■□□□ 1.15
TRIM13-203ENST00000378183 CYP2J2P51589 502 aa22.26■■□□□ 1.15
TRIM13-203ENST00000378183 EP400NLQ6ZTU2 488 aa22.26■■□□□ 1.15
TRIM13-203ENST00000378183 ATXN2LQ8WWM7 1075 aaKnown RBP22.26■■□□□ 1.15
TRIM13-203ENST00000378183 GSDMAQ96QA5 445 aa22.26■■□□□ 1.15
TRIM13-203ENST00000378183 RXFP1Q9HBX9 757 aa22.26■■□□□ 1.15
TRIM13-203ENST00000378183 CLEC1BQ9P126 229 aa22.26■■□□□ 1.15
TRIM13-203ENST00000378183 ZNF233A6NK53 670 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 PPEF2O14830 753 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 XPOTO43592 962 aaKnown RBP22.25■■□□□ 1.15
TRIM13-203ENST00000378183 FGFR3P22607 806 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 ELAVL2Q12926 359 aaKnown RBP22.25■■□□□ 1.15
TRIM13-203ENST00000378183 KIAA1841Q6NSI8 718 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 PRSS55Q6UWB4 352 aaPredicted RBP22.25■■□□□ 1.15
TRIM13-203ENST00000378183 TMEM184AQ6ZMB5 413 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 SMYD4Q8IYR2 804 aaPredicted RBP22.25■■□□□ 1.15
TRIM13-203ENST00000378183 XXYLT1Q8NBI6 393 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 BEST2Q8NFU1 509 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 SLC22A17Q8WUG5 538 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 RIN2Q8WYP3 895 aaPredicted RBP22.25■■□□□ 1.15
TRIM13-203ENST00000378183 SMARCE1Q969G3 411 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 FAM84AQ96KN4 292 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 TTPALQ9BTX7 342 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 PDE11AQ9HCR9 933 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 DMAC2Q9NW81 257 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 SSX2IPQ9Y2D8 614 aa22.25■■□□□ 1.15
TRIM13-203ENST00000378183 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.25■■□□□ 1.15
TRIM13-203ENST00000378183 H3BQ06 376 aaPredicted RBP22.24■■□□□ 1.15
TRIM13-203ENST00000378183 PDXKO00764 312 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 TEX28O15482 410 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 SMC2O95347 1197 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 SNRNP35Q16560 246 aaKnown RBP22.24■■□□□ 1.15
TRIM13-203ENST00000378183 LEXMQ3ZCV2 418 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 C9orf57Q5W0N0 161 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 SCARA3Q6AZY7 606 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 LLGL2Q6P1M3 1020 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.24■■□□□ 1.15
TRIM13-203ENST00000378183 CEP57Q86XR8 500 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 GPR65Q8IYL9 337 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 GUF1Q8N442 669 aaKnown RBP22.24■■□□□ 1.15
TRIM13-203ENST00000378183 RDH13Q8NBN7 331 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 GOLGA5Q8TBA6 731 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 LNX1Q8TBB1 728 aaPredicted RBP22.24■■□□□ 1.15
TRIM13-203ENST00000378183 TMEM174Q8WUU8 243 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 EMILIN2Q9BXX0 1053 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 KIAA1586Q9HCI6 787 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 RMND1Q9NWS8 449 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 HOOK1Q9UJC3 728 aaKnown RBP22.24■■□□□ 1.15
TRIM13-203ENST00000378183 BARX2Q9UMQ3 279 aaPredicted RBP22.24■■□□□ 1.15
TRIM13-203ENST00000378183 HCFC2Q9Y5Z7 792 aa22.24■■□□□ 1.15
TRIM13-203ENST00000378183 ANO9A1A5B4 782 aa22.23■■□□□ 1.15
TRIM13-203ENST00000378183 PIRO00625 290 aa22.23■■□□□ 1.15
TRIM13-203ENST00000378183 RPL17P18621 184 aaKnown RBP22.23■■□□□ 1.15
TRIM13-203ENST00000378183 TKTP29401 623 aaKnown RBP22.23■■□□□ 1.15
TRIM13-203ENST00000378183 NDUFV1P49821 464 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms