RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 P4HA2O15460 535 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 ACADSP16219 412 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 RPA3P35244 121 aaPredicted RBP17.54■□□□□ 0.4
TRIM39-201ENST00000376656 CMPK2Q5EBM0 449 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 HP1BP3Q5SSJ5 553 aaPredicted RBP17.54■□□□□ 0.4
TRIM39-201ENST00000376656 RFWD3Q6PCD5 774 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 EGFL6Q8IUX8 553 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 SHC3Q92529 594 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 NACC1Q96RE7 527 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 NUMBLQ9Y6R0 609 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 C6orf229H3BNL8 230 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 FGFR1P11362 822 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 BMP3P12645 472 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 PRELPP51888 382 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 SESN3P58005 492 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 CDR2Q01850 454 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 SLC1A5Q15758 541 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 LLGL2Q6P1M3 1020 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 ZNF365Q70YC5 407 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 TEKT4Q8WW24 435 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 MKL1Q969V6 931 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 RALAP11233 206 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 PECAM1P16284 738 aaPredicted RBP17.54■□□□□ 0.4
TRIM39-201ENST00000376656 KLC1Q07866 573 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 PPP2R5CQ13362 524 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 PDK4Q16654 411 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 TSNAXIP1Q2TAA8 658 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 ACAD10Q6JQN1 1059 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 CDC42EP5Q6NZY7 148 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 LRRC8CQ8TDW0 803 aa17.54■□□□□ 0.4
TRIM39-201ENST00000376656 DHX38Q92620 1227 aaKnown RBP17.54■□□□□ 0.4
TRIM39-201ENST00000376656 PAPOLBQ9NRJ5 636 aaKnown RBP17.54■□□□□ 0.4
TRIM39-201ENST00000376656 GOLGA8IPA6NC78 632 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 GOLGA8JA6NMD2 632 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 RIMBP2O15034 1052 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 PAPOLAP51003 745 aaKnown RBP17.53■□□□□ 0.4
TRIM39-201ENST00000376656 MUM1Q2TAK8 710 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 RC3H1Q5TC82 1133 aaKnown RBP17.53■□□□□ 0.4
TRIM39-201ENST00000376656 MAIP1Q8WWC4 291 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 MRRFQ96E11 262 aaKnown RBP17.53■□□□□ 0.4
TRIM39-201ENST00000376656 DDX27Q96GQ7 796 aaKnown RBP17.53■□□□□ 0.4
TRIM39-201ENST00000376656 SAYSD1Q9NPB0 183 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 F5H6K3 240 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 NPTXRO95502 500 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 MUTP22033 750 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 MYBPC2Q14324 1141 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 RBBP5Q15291 538 aaKnown RBP17.53■□□□□ 0.4
TRIM39-201ENST00000376656 KHDC1Q4VXA5 237 aaKnown RBP17.53■□□□□ 0.4
TRIM39-201ENST00000376656 RGS9BPQ6ZS82 235 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 CAPN12Q6ZSI9 719 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 CCDC125Q86Z20 511 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 RIBC1Q8N443 379 aaPredicted RBP17.53■□□□□ 0.4
TRIM39-201ENST00000376656 RNF217Q8TC41 542 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 UCMAQ8WVF2 138 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 CCDC17Q96LX7 622 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 MIPEPQ99797 713 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 HSPBP1Q9NZL4 362 aa17.53■□□□□ 0.4
TRIM39-201ENST00000376656 ZNF831Q5JPB2 1677 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 ARHGEF35A5YM69 484 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 TRAFD1O14545 582 aaPredicted RBP17.52■□□□□ 0.4
TRIM39-201ENST00000376656 PRPF4O43172 522 aaKnown RBP eCLIP17.52■□□□□ 0.4
TRIM39-201ENST00000376656 GRIN3BO60391 1043 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 GAS7O60861 476 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 KRT15P19012 456 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 RASSF2P50749 326 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 LBRQ14739 615 aaKnown RBP17.52■□□□□ 0.4
TRIM39-201ENST00000376656 C2CD6Q53TS8 623 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 OTOAQ7RTW8 1153 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 RELL1Q8IUW5 271 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 RBBP8NLQ8NC74 664 aaPredicted RBP17.52■□□□□ 0.4
TRIM39-201ENST00000376656 DDX1Q92499 740 aaKnown RBP17.52■□□□□ 0.4
TRIM39-201ENST00000376656 LBHD1Q9BQE6 289 aaPredicted RBP17.52■□□□□ 0.4
TRIM39-201ENST00000376656 NMRK1Q9NWW6 199 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 NYAP2Q9P242 653 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 ZFP69BQ9UJL9 534 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 ADAMTSL1Q8N6G6 1762 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 MROH7Q68CQ1 1323 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 RBBP6Q7Z6E9 1792 aaKnown RBP17.52■□□□□ 0.4
TRIM39-201ENST00000376656 KLHL33A6NCF5 533 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 ABLIM1O14639 778 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 ADRB2P07550 413 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 CA4P22748 312 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 SP100P23497 879 aaPredicted RBP17.52■□□□□ 0.4
TRIM39-201ENST00000376656 PTPN4P29074 926 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 RFC5P40937 340 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 RAB27AP51159 221 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 MFAP3P55082 362 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 P3H1Q32P28 736 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 UNC45AQ9H3U1 944 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 DLGAP2Q9P1A6 1054 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 ATRNL1Q5VV63 1379 aa17.52■□□□□ 0.4
TRIM39-201ENST00000376656 ANKRD33BA6NCL7 494 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 MARK3P27448 753 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 KLF1Q13351 362 aaPredicted RBP17.52■□□□□ 0.39
TRIM39-201ENST00000376656 FASTKD3Q14CZ7 662 aaKnown RBP17.52■□□□□ 0.39
TRIM39-201ENST00000376656 SGSM1Q2NKQ1 1148 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 TBC1D10BQ4KMP7 808 aaPredicted RBP17.52■□□□□ 0.39
TRIM39-201ENST00000376656 PCNX4Q63HM2 1172 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 NLRP9Q7RTR0 991 aa17.52■□□□□ 0.39
TRIM39-201ENST00000376656 APBB1IPQ7Z5R6 666 aaPredicted RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms