RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PAIP2Q9BPZ3 127 aaKnown RBP15.05■□□□□ 0
CLCNKA-202ENST00000375692 HEMGNQ9BXL5 484 aa15.05■□□□□ 0
CLCNKA-202ENST00000375692 ADAM22Q9P0K1 906 aa15.05■□□□□ 0
CLCNKA-202ENST00000375692 PIK3CDO00329 1044 aa15.05■□□□□ -0
CLCNKA-202ENST00000375692 CYP11B1P15538 503 aa15.05■□□□□ -0
CLCNKA-202ENST00000375692 MXI1P50539 228 aa15.05■□□□□ -0
CLCNKA-202ENST00000375692 SLC8A3P57103 927 aa15.05■□□□□ -0
CLCNKA-202ENST00000375692 ZYXQ15942 572 aaKnown RBP15.05■□□□□ -0
CLCNKA-202ENST00000375692 ECHDC2Q86YB7 292 aa15.05■□□□□ -0
CLCNKA-202ENST00000375692 KCTD17Q8N5Z5 321 aa15.05■□□□□ -0
CLCNKA-202ENST00000375692 KCNV2Q8TDN2 545 aa15.05■□□□□ -0
CLCNKA-202ENST00000375692 SNF8Q96H20 258 aa15.05■□□□□ -0
CLCNKA-202ENST00000375692 C9orf72Q96LT7 481 aa15.05■□□□□ -0
CLCNKA-202ENST00000375692 GGA3Q9NZ52 723 aa15.05■□□□□ -0
CLCNKA-202ENST00000375692 ANAPC5Q9UJX4 755 aa15.05■□□□□ -0
CLCNKA-202ENST00000375692 EIF4E1BA6NMX2 242 aaKnown RBP15.04■□□□□ -0
CLCNKA-202ENST00000375692 ADRB2P07550 413 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 CCND1P24385 295 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 CEP55Q53EZ4 464 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 GBP7Q8N8V2 638 aaPredicted RBP15.04■□□□□ -0
CLCNKA-202ENST00000375692 XXYLT1Q8NBI6 393 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 FAM84AQ96KN4 292 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 ARHGEF10LQ9HCE6 1279 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 GTF3C4Q9UKN8 822 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 ZBTB21Q9ULJ3 1066 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 TMEM150BA6NC51 233 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 CAP2P40123 477 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 CBWD2Q8IUF1 395 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 TRIM6Q9C030 488 aaPredicted RBP15.04■□□□□ -0
CLCNKA-202ENST00000375692 KLHL14Q9P2G3 628 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 ANAPC7Q9UJX3 599 aa15.04■□□□□ -0
CLCNKA-202ENST00000375692 COL2A1P02458 1487 aaPredicted RBP15.04■□□□□ -0
CLCNKA-202ENST00000375692 CCDC189A1A4V9 331 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 O00370 1275 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 POLR2MP0CAP2 368 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 TAC1P20366 129 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 ATP5DP30049 168 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 DGKZQ13574 1117 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 TMEM63BQ5T3F8 832 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 SLC17A8Q8NDX2 589 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 IFT74Q96LB3 600 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 ETNK1Q9HBU6 452 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 TOPORSQ9NS56 1045 aaPredicted RBP15.03■□□□□ -0
CLCNKA-202ENST00000375692 IPO5O00410 1097 aaKnown RBP15.03■□□□□ -0
CLCNKA-202ENST00000375692 TBC1D12O60347 775 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 SPAG7O75391 227 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 ATF2P15336 505 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 MAPK4P31152 587 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 TNFAIP1Q13829 316 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 SHC3Q92529 594 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 SPOCK2Q92563 424 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 SLCO2A1Q92959 643 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 UTP4Q969X6 686 aaKnown RBP15.03■□□□□ -0
CLCNKA-202ENST00000375692 SAAL1Q96ER3 474 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 ACCSQ96QU6 501 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 GPRC5CQ9NQ84 441 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 SLC5A4Q9NY91 659 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 UVRAGQ9P2Y5 699 aa15.03■□□□□ -0
CLCNKA-202ENST00000375692 P4HA2O15460 535 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 GRIN3BO60391 1043 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 CDR2Q01850 454 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 MAP3K10Q02779 954 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 RNASELQ05823 741 aaKnown RBP15.02■□□□□ -0
CLCNKA-202ENST00000375692 PTK6Q13882 451 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 PRKG1Q13976 671 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 MYBPC2Q14324 1141 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 MAGEB18Q96M61 343 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 PITPNM3Q9BZ71 974 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 DCLK3Q9C098 648 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 TMEM206Q9H813 350 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 NKIRAS1Q9NYS0 192 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 KCND2Q9NZV8 630 aa15.02■□□□□ -0
CLCNKA-202ENST00000375692 LARSQ9P2J5 1176 aaKnown RBP15.02■□□□□ -0
CLCNKA-202ENST00000375692 SLC16A4O15374 487 aa15.02□□□□□ -0.01
CLCNKA-202ENST00000375692 RRM1P23921 792 aa15.02□□□□□ -0.01
CLCNKA-202ENST00000375692 MFAP3P55082 362 aa15.02□□□□□ -0.01
CLCNKA-202ENST00000375692 WDR4P57081 412 aaKnown RBP15.02□□□□□ -0.01
CLCNKA-202ENST00000375692 MTFR1Q15390 333 aa15.02□□□□□ -0.01
CLCNKA-202ENST00000375692 CYP4F22Q6NT55 531 aa15.02□□□□□ -0.01
CLCNKA-202ENST00000375692 DDX1Q92499 740 aaKnown RBP15.02□□□□□ -0.01
CLCNKA-202ENST00000375692 TEKT3Q9BXF9 490 aa15.02□□□□□ -0.01
CLCNKA-202ENST00000375692 NKX1-2Q9UD57 310 aaPredicted RBP15.02□□□□□ -0.01
CLCNKA-202ENST00000375692 LACTBP83111 547 aaPredicted RBP15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 TMED2Q15363 201 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 HP1BP3Q5SSJ5 553 aaPredicted RBP15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 ACAD10Q6JQN1 1059 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 ARHGEF18Q6ZSZ5 1173 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 HAUS6Q7Z4H7 955 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 HELQQ8TDG4 1101 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 VTI1AQ96AJ9 217 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 SPDL1Q96EA4 605 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 TMEM237Q96Q45 408 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 FAM167BQ9BTA0 163 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 TRAIPQ9BWF2 469 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 ADAM33Q9BZ11 813 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 WDR11Q9BZH6 1224 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 MYLK2Q9H1R3 596 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 RASA4BC9J798 803 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 RASA4O43374 803 aa15.01□□□□□ -0.01
CLCNKA-202ENST00000375692 KRT5P13647 590 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms