RNA–Protein interactions for RNA: ENST00000372915.7

MACF1-204, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 23,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-204	ENST00000372915	PRRG3	Q9BZD7	231 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	PUS7L	Q9H0K6	701 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	ZNF682	O95780	498 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	UMPS	P11172	480 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	GJA1	P17302	382 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	TRIM48	Q8IWZ4	208 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	GHDC	Q8N2G8	530 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	PRIM2	P49643	509 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	HMBOX1	Q6NT76	420 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	BLID	Q8IZY5	108 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	STX19	Q8N4C7	294 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	RIN2	Q8WYP3	895 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	ZNF222	Q9UK12	451 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	SPEF1	Q9Y4P9	236 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	SMG6	Q86US8	1419 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	PNMA6E	A0A0J9YXQ4	647 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	DEXI	O95424	95 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	CES3	Q6UWW8	571 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	CPA5	Q8WXQ8	436 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	ERP27	Q96DN0	273 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	TELO2	Q9Y4R8	837 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	SOGA1	O94964	1423 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	TAF4	O00268	1085 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	TXN	P10599	105 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	CYP2F1	P24903	491 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	PPARA	Q07869	468 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	CNGA3	Q16281	694 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	STRIP1	Q5VSL9	837 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	C9orf72	Q96LT7	481 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	METTL5	Q9NRN9	209 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	SLC16A4	O15374	487 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	PMPCB	O75439	489 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	ZBED8	Q8IZ13	594 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	TPD52L3	Q96J77	140 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	ADAM22	Q9P0K1	906 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	SH3BP4	Q9P0V3	963 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	TDRKH	Q9Y2W6	561 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-204	ENST00000372915		A0A1W2PQ67	120 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915		M0QYV0	167 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	NMT2	O60551	498 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	MFAP3	P55082	362 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	COG2	Q14746	738 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	TAF1B	Q53T94	588 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	ARMC4	Q5T2S8	1044 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	ANKS3	Q6ZW76	656 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	PADI4	Q9UM07	663 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915		A0A075B6Q4	140 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	LONRF1	Q17RB8	773 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	SHCBP1	Q8NEM2	672 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	IPMK	Q8NFU5	416 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	NT5C1B	Q96P26	610 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	SERPINI1	Q99574	410 aa		4.05	□□□□□ -1.76
MACF1-204	ENST00000372915	TRIM49B	A6NDI0	452 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	CYP2D6	P10635	497 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	DNAJB2	P25686	324 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	NUP62	P37198	522 aa	Predicted RBP	4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	STX3	Q13277	289 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	CAMK1	Q14012	370 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	KIAA1755	Q5JYT7	1200 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	LRRC31	Q6UY01	552 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	TTLL7	Q6ZT98	887 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	CHURC1	Q8WUH1	139 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	HDAC2	Q92769	488 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	QKI	Q96PU8	341 aa	Known RBP eCLIP	4.04	□□□□□ -1.76	3e-12	■■■■■ 57
MACF1-204	ENST00000372915	CEP41	Q9BYV8	373 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	SEC31B	Q9NQW1	1179 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	AP3D1	O14617	1153 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	APRT	P07741	180 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	TRIM49	P0CI25	452 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	TRIM49C	P0CI26	452 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	EIF2S3	P41091	472 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	MGAT5B	Q3V5L5	792 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	MARK2	Q7KZI7	788 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	GPRASP2	Q96D09	838 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	SEPHS2	Q99611	448 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	DDX47	Q9H0S4	455 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-204	ENST00000372915		E7EWF7	191 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	LBP	P18428	481 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	YWHAQ	P27348	245 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	SARS	P49591	514 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	KIF11	P52732	1056 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.04	□□□□□ -1.76	1e-6	■■■□□ 15.1
MACF1-204	ENST00000372915	HMG20B	Q9P0W2	317 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	ATXN2	Q99700	1313 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	FTL	P02792	175 aa	Predicted RBP	4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	TMEM11	P17152	192 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	ALOX12	P18054	663 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	ABCB5	Q2M3G0	1257 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	NETO2	Q8NC67	525 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	CNOT6L	Q96LI5	555 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	MYOC	Q99972	504 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	CIDEB	Q9UHD4	219 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	BRAF	P15056	766 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	PDIA3	P30101	505 aa	Known RBP	4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	DGKD	Q16760	1214 aa		4.04	□□□□□ -1.76
MACF1-204	ENST00000372915	ARMC5	Q96C12	935 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms