RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 WDR49Q8IV35 697 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 ENOX1Q8TC92 643 aaKnown RBP17.67■□□□□ 0.42
TMEM53-203ENST00000372242 ARNTL2Q8WYA1 636 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 ZNF516Q92618 1163 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 TSPAN18Q96SJ8 248 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 CGRRF1Q99675 332 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 SAMSN1Q9NSI8 373 aaKnown RBP17.67■□□□□ 0.42
TMEM53-203ENST00000372242 INTS13Q9NVM9 706 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 DPP3Q9NY33 737 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 ARMCX3Q9UH62 379 aaPredicted RBP17.67■□□□□ 0.42
TMEM53-203ENST00000372242 FAN1Q9Y2M0 1017 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 NFE2L3Q9Y4A8 694 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 PCDHB12Q9Y5F1 795 aa17.67■□□□□ 0.42
TMEM53-203ENST00000372242 ITGB1P05556 798 aa17.66■□□□□ 0.42
TMEM53-203ENST00000372242 TMEM191BP0C7N4 346 aa17.66■□□□□ 0.42
TMEM53-203ENST00000372242 ZNF165P49910 485 aa17.66■□□□□ 0.42
TMEM53-203ENST00000372242 ERVK-21P61565 698 aa17.66■□□□□ 0.42
TMEM53-203ENST00000372242 AOPEPQ8N6M6 819 aa17.66■□□□□ 0.42
TMEM53-203ENST00000372242 BEST2Q8NFU1 509 aa17.66■□□□□ 0.42
TMEM53-203ENST00000372242 TMC2Q8TDI7 906 aa17.66■□□□□ 0.42
TMEM53-203ENST00000372242 HASPINQ8TF76 798 aa17.66■□□□□ 0.42
TMEM53-203ENST00000372242 BCL7CQ8WUZ0 217 aaPredicted RBP17.66■□□□□ 0.42
TMEM53-203ENST00000372242 TMEM175Q9BSA9 504 aa17.66■□□□□ 0.42
TMEM53-203ENST00000372242 NAT10Q9H0A0 1025 aaKnown RBP17.66■□□□□ 0.42
TMEM53-203ENST00000372242 ZNF576Q9H609 170 aa17.66■□□□□ 0.42
TMEM53-203ENST00000372242 AAASQ9NRG9 546 aa17.66■□□□□ 0.42
TMEM53-203ENST00000372242 SZT2Q5T011 3432 aa17.66■□□□□ 0.42
TMEM53-203ENST00000372242 PPEF2O14830 753 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 XPOTO43592 962 aaKnown RBP17.65■□□□□ 0.42
TMEM53-203ENST00000372242 FGFR1OPO95684 399 aaKnown RBP17.65■□□□□ 0.42
TMEM53-203ENST00000372242 CYP3A5P20815 502 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 UPP1Q16831 310 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 DUOXA2Q1HG44 320 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 DCAF17Q5H9S7 520 aaPredicted RBP17.65■□□□□ 0.42
TMEM53-203ENST00000372242 TCERG1LQ5VWI1 586 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 NT5DC4Q86YG4 428 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 C1orf127Q8N9H9 656 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 KLHL23Q8NBE8 558 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 C3orf58Q8NDZ4 430 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 CACTINQ8WUQ7 758 aaKnown RBP17.65■□□□□ 0.42
TMEM53-203ENST00000372242 MMRN2Q9H8L6 949 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 PODXLO00592 558 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 B3GAT3O94766 335 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 KIF4AO95239 1232 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 CLDN10P78369 228 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 MYL5Q02045 173 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 FRMD5Q7Z6J6 570 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 SLC39A11Q8N1S5 342 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 ANKRD36BP1Q96IX9 119 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 CNOT6LQ96LI5 555 aaKnown RBP17.65■□□□□ 0.42
TMEM53-203ENST00000372242 TTYH1Q9H313 450 aaPredicted RBP17.65■□□□□ 0.42
TMEM53-203ENST00000372242 FANCLQ9NW38 375 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 MARCH5Q9NX47 278 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 SPG21Q9NZD8 308 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 RWDD3Q9Y3V2 267 aa17.65■□□□□ 0.42
TMEM53-203ENST00000372242 EPOPA6NHQ4 379 aa17.64■□□□□ 0.41
TMEM53-203ENST00000372242 FGF18O76093 207 aa17.64■□□□□ 0.41
TMEM53-203ENST00000372242 TNNC2P02585 160 aa17.64■□□□□ 0.41
TMEM53-203ENST00000372242 ITGB3P05106 788 aa17.64■□□□□ 0.41
TMEM53-203ENST00000372242 PPP3CAQ08209 521 aa17.64■□□□□ 0.41
TMEM53-203ENST00000372242 C9orf57Q5W0N0 161 aa17.64■□□□□ 0.41
TMEM53-203ENST00000372242 FBXO22Q8NEZ5 403 aa17.64■□□□□ 0.41
TMEM53-203ENST00000372242 IGSF21Q96ID5 467 aa17.64■□□□□ 0.41
TMEM53-203ENST00000372242 UROC1Q96N76 676 aa17.64■□□□□ 0.41
TMEM53-203ENST00000372242 THAP9Q9H5L6 903 aa17.64■□□□□ 0.41
TMEM53-203ENST00000372242 METTL14Q9HCE5 456 aaKnown RBP17.64■□□□□ 0.41
TMEM53-203ENST00000372242 ALG13Q9NP73 1137 aaKnown RBP17.64■□□□□ 0.41
TMEM53-203ENST00000372242 C5orf67F2Z3F1 127 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 RFXAPO00287 272 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 IKBKBO14920 756 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 GNA14O95837 355 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 KRT19P08727 400 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 LRPAP1P30533 357 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 POLR2BP30876 1174 aaKnown RBP17.63■□□□□ 0.41
TMEM53-203ENST00000372242 RPL9P32969 192 aaKnown RBP17.63■□□□□ 0.41
TMEM53-203ENST00000372242 GCLMP48507 274 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 NCAPHQ15003 741 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 LRSAM1Q6UWE0 723 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 TRAPPC11Q7Z392 1133 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 USP37Q86T82 979 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 DHX40Q8IX18 779 aaKnown RBP17.63■□□□□ 0.41
TMEM53-203ENST00000372242 CXorf38Q8TB03 319 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 SLC35C1Q96A29 364 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 DDX27Q96GQ7 796 aaKnown RBP17.63■□□□□ 0.41
TMEM53-203ENST00000372242 FAM161BQ96MY7 647 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 COLEC11Q9BWP8 271 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 PLVAPQ9BX97 442 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 SIX4Q9UIU6 781 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 ANO9A1A5B4 782 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 PPM1AP35813 382 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 TDRD10Q5VZ19 366 aaKnown RBP17.63■□□□□ 0.41
TMEM53-203ENST00000372242 DCLRE1AQ6PJP8 1040 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 CD300LGQ6UXG3 332 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 TRIM59Q8IWR1 403 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 TMEM169Q96HH4 297 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 SAMD11Q96NU1 681 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 BPIFA3Q9BQP9 254 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 ADAM28Q9UKQ2 775 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 AGAP1Q9UPQ3 857 aa17.63■□□□□ 0.41
TMEM53-203ENST00000372242 TRANK1O15050 2925 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms