RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 QPCTQ16769 361 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 TLDC1Q6P9B6 456 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 B3GNT9Q6UX72 402 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 ZNF571Q7Z3V5 609 aaPredicted RBP12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 NECAB2Q7Z6G3 386 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 PIGWQ7Z7B1 504 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 NT5DC3Q86UY8 548 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 CCDC60Q8IWA6 550 aaPredicted RBP12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 MAGOHBQ96A72 148 aaKnown RBP12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 SPAG5Q96R06 1193 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 PCYT2Q99447 389 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 NEUROG2Q9H2A3 272 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 CENPHQ9H3R5 247 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 TUT1Q9H6E5 874 aaKnown RBP12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 C11orf49Q9H6J7 331 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 STARD7Q9NQZ5 370 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 ZNF302Q9NR11 478 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 BATF3Q9NR55 127 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 AMFRQ9UKV5 643 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 NCANO14594 1321 aa12.28□□□□□ -0.44
TSPAN1-201ENST00000372003 GOLGA6L10A0A0M3HER8 536 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 DAPK3O43293 454 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 HOXD8P13378 290 aaPredicted RBP12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 UCHL3P15374 230 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 MMP13P45452 471 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 PTENP60484 403 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 DHX9Q08211 1270 aaKnown RBP12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 FAM47CQ5HY64 1035 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 FAM228AQ86W67 206 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 KCTD17Q8N5Z5 321 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 BANK1Q8NDB2 785 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 ZNF317Q96PQ6 595 aaPredicted RBP12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 FMO2Q99518 471 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 NSRP1Q9H0G5 558 aaKnown RBP12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 CARD9Q9H257 536 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 SMARCAD1Q9H4L7 1026 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 HAUS2Q9NVX0 235 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 RGL1Q9NZL6 768 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 BCCIPQ9P287 314 aaKnown RBP eCLIP12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 PARP2Q9UGN5 583 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 SLC12A4Q9UP95 1085 aa12.27□□□□□ -0.44
TSPAN1-201ENST00000372003 KIAA1217Q5T5P2 1943 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 CALUO43852 315 aaPredicted RBP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 CABYRO75952 493 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 AGTP01019 485 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 TMOD1P28289 359 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 PSEN2P49810 448 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 JAM2P57087 298 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 ELF3P78545 371 aaPredicted RBP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 CYP4A11Q02928 519 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 ADCY2Q08462 1091 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 ITGA7Q13683 1181 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 CTTNQ14247 550 aaKnown RBP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 MFSD10Q14728 455 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 EPHA7Q15375 998 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 EXOC3L4Q17RC7 722 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 NBPF20Q3BBV1 942 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 C6orf118Q5T5N4 469 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 FAM160B1Q5W0V3 765 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 KCNK18Q7Z418 384 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 MAB21L3Q8N8X9 362 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 OR2W6PQ8NHA6 318 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 SCFD1Q8WVM8 642 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 N4BP2L2Q92802 583 aaPredicted RBP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 DYDC2Q96IM9 177 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 RUNDC3BQ96NL0 473 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 EIF2AK1Q9BQI3 630 aaKnown RBP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 DDX47Q9H0S4 455 aaKnown RBP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 PABPC3Q9H361 631 aaKnown RBP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 RNPEPQ9H4A4 650 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 ARMCX3Q9UH62 379 aaPredicted RBP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 RASAL2Q9UJF2 1139 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 IGKV6D-21A0A0A0MT36 114 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 PDXKO00764 312 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 LGR5O75473 907 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 ATP6V1G2O95670 118 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 F2P00734 622 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 TMEM253P0C7T8 217 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 COL6A1P12109 1028 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 RPL13P26373 211 aaKnown RBP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 PON1P27169 355 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 DNA2P51530 1060 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 RNASE9P60153 205 aaKnown RBP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 TCEAL1Q15170 157 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 UGCGQ16739 394 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 BMT2Q1RMZ1 405 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 DUPD1Q68J44 220 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 SLC39A5Q6ZMH5 540 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 DDX42Q86XP3 938 aaKnown RBP eCLIP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 TPH2Q8IWU9 490 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 GBP7Q8N8V2 638 aaPredicted RBP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 RDM1Q8NG50 284 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 NEK9Q8TD19 979 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 RSRC1Q96IZ7 334 aaKnown RBP12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 PLCD4Q9BRC7 762 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 KATNAL1Q9BW62 490 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 AP1M1Q9BXS5 423 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 EBF2Q9HAK2 575 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 ERAP1Q9NZ08 941 aa12.26□□□□□ -0.45
TSPAN1-201ENST00000372003 SAMD15Q9P1V8 674 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms