RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 KRT12Q99456 494 aa13.72□□□□□ -0.21
GPC3-201ENST00000370818 CCDC113Q9H0I3 377 aa13.72□□□□□ -0.21
GPC3-201ENST00000370818 CHORDC1Q9UHD1 332 aaPredicted RBP13.72□□□□□ -0.21
GPC3-201ENST00000370818 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.72□□□□□ -0.21
GPC3-201ENST00000370818 CNTNAP2Q9UHC6 1331 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 A0A1B0GUA9 196 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 DDX3YO15523 660 aaKnown RBP13.71□□□□□ -0.21
GPC3-201ENST00000370818 FAM189A1O60320 539 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 HLA-DRAP01903 254 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 TXNP10599 105 aaKnown RBP13.71□□□□□ -0.21
GPC3-201ENST00000370818 ATP1A2P50993 1020 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 CDR1P51861 262 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 GPC5P78333 572 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 SEZ6Q53EL9 994 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 IER5Q5VY09 327 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 ALS2CLQ60I27 953 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 CDCA2Q69YH5 1023 aaPredicted RBP13.71□□□□□ -0.21
GPC3-201ENST00000370818 ENOSF1Q7L5Y1 443 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 PARP9Q8IXQ6 854 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.71□□□□□ -0.21
GPC3-201ENST00000370818 GGA2Q9UJY4 613 aa13.71□□□□□ -0.21
GPC3-201ENST00000370818 NOC2LQ9Y3T9 749 aaKnown RBP13.71□□□□□ -0.21
GPC3-201ENST00000370818 LDHAP00338 332 aaKnown RBP13.71□□□□□ -0.22
GPC3-201ENST00000370818 CALCAP01258 141 aa13.71□□□□□ -0.22
GPC3-201ENST00000370818 PDE6CP51160 858 aa13.71□□□□□ -0.22
GPC3-201ENST00000370818 LAMTOR4Q0VGL1 99 aa13.71□□□□□ -0.22
GPC3-201ENST00000370818 IFT88Q13099 833 aa13.71□□□□□ -0.22
GPC3-201ENST00000370818 DCAF12L1Q5VU92 463 aa13.71□□□□□ -0.22
GPC3-201ENST00000370818 ZPBP2Q6X784 338 aa13.71□□□□□ -0.22
GPC3-201ENST00000370818 KIRREL3Q8IZU9 778 aa13.71□□□□□ -0.22
GPC3-201ENST00000370818 TSEN2Q8NCE0 465 aaKnown RBP13.71□□□□□ -0.22
GPC3-201ENST00000370818 RNPC3Q96LT9 517 aaKnown RBP13.71□□□□□ -0.22
GPC3-201ENST00000370818 ZSCAN5CA6NGD5 496 aaPredicted RBP13.7□□□□□ -0.22
GPC3-201ENST00000370818 PGRMC1O00264 195 aaKnown RBP13.7□□□□□ -0.22
GPC3-201ENST00000370818 TNFRSF8P28908 595 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 ZKSCAN8Q15776 578 aaPredicted RBP13.7□□□□□ -0.22
GPC3-201ENST00000370818 SCARA3Q6AZY7 606 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 SPOPLQ6IQ16 392 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 FUKQ8N0W3 1084 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 SH2D3CQ8N5H7 860 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 ZNF483Q8TF39 744 aaPredicted RBP13.7□□□□□ -0.22
GPC3-201ENST00000370818 TRAPPC12Q8WVT3 735 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 MS4A4AQ96JQ5 239 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 CCT8L2Q96SF2 557 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 APOBEC3GQ9HC16 384 aaKnown RBP13.7□□□□□ -0.22
GPC3-201ENST00000370818 GDF3Q9NR23 364 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 C1orf112Q9NSG2 853 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 CTTNBP2NLQ9P2B4 639 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 ANKRD33BA6NCL7 494 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 IQCA1LA6NCM1 817 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 CLDN3O15551 220 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 ATMINO43313 823 aaPredicted RBP13.7□□□□□ -0.22
GPC3-201ENST00000370818 SRGAP2CP0DJJ0 459 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 EFNA5P52803 228 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 GUCY1A3Q02108 690 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 EMC10Q5UCC4 262 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 MAP1SQ66K74 1059 aaPredicted RBP13.7□□□□□ -0.22
GPC3-201ENST00000370818 CYB5D1Q6P9G0 228 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 ARMCX2Q7L311 632 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 RNF149Q8NC42 400 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 OR5B17Q8NGF7 314 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 AP1M1Q9BXS5 423 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 ZNF408Q9H9D4 720 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 PNMA3Q9UL41 463 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 ALG6Q9Y672 507 aa13.7□□□□□ -0.22
GPC3-201ENST00000370818 MCM3APO60318 1980 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 RAD51CO43502 376 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 GAS2O43903 313 aaKnown RBP13.69□□□□□ -0.22
GPC3-201ENST00000370818 HEXIM1O94992 359 aaKnown RBP13.69□□□□□ -0.22
GPC3-201ENST00000370818 HARSP12081 509 aaKnown RBP13.69□□□□□ -0.22
GPC3-201ENST00000370818 KRT5P13647 590 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 EZRP15311 586 aaKnown RBP13.69□□□□□ -0.22
GPC3-201ENST00000370818 PIK3CAP42336 1068 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 NNTQ13423 1086 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 BIRC3Q13489 604 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 MXD4Q14582 209 aaPredicted RBP13.69□□□□□ -0.22
GPC3-201ENST00000370818 TTLL4Q14679 1199 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 KCTD16Q68DU8 428 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 KDM7AQ6ZMT4 941 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 PNMA8AQ86V59 439 aaPredicted RBP13.69□□□□□ -0.22
GPC3-201ENST00000370818 CCDC50Q8IVM0 306 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 KLHL7Q8IXQ5 586 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 GPRC5AQ8NFJ5 357 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 ZBTB10Q96DT7 871 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 CALR3Q96L12 384 aaKnown RBP13.69□□□□□ -0.22
GPC3-201ENST00000370818 CGRRF1Q99675 332 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 TPX2Q9ULW0 747 aaKnown RBP13.69□□□□□ -0.22
GPC3-201ENST00000370818 ESYT3A0FGR9 886 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 ASB14A6NK59 587 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 PDHXO00330 501 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 ABLIM1O14639 778 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 TOM1L1O75674 476 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 MTA2O94776 668 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 GJB1P08034 283 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 TNFSF9P41273 254 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 SEC24CP53992 1094 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 TNNC1P63316 161 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 PTGISQ16647 500 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 ZNF792Q3KQV3 632 aa13.69□□□□□ -0.22
GPC3-201ENST00000370818 WDR44Q5JSH3 913 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms