RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 ZNF200P98182 395 aaPredicted RBP9□□□□□ -0.97
LCA5-201ENST00000369846 RALGDSQ12967 914 aa9□□□□□ -0.97
LCA5-201ENST00000369846 PDAP1Q13442 181 aaKnown RBP9□□□□□ -0.97
LCA5-201ENST00000369846 TBC1D9BQ66K14 1250 aa9□□□□□ -0.97
LCA5-201ENST00000369846 OR6B2Q6IFH4 312 aa9□□□□□ -0.97
LCA5-201ENST00000369846 ZBTB49Q6ZSB9 765 aa9□□□□□ -0.97
LCA5-201ENST00000369846 FRA10AC1Q70Z53 315 aa9□□□□□ -0.97
LCA5-201ENST00000369846 METTL16Q86W50 562 aaKnown RBP9□□□□□ -0.97
LCA5-201ENST00000369846 TBCKQ8TEA7 893 aa9□□□□□ -0.97
LCA5-201ENST00000369846 VPS50Q96JG6 964 aa9□□□□□ -0.97
LCA5-201ENST00000369846 PABPC3Q9H361 631 aaKnown RBP9□□□□□ -0.97
LCA5-201ENST00000369846 HSPBP1Q9NZL4 362 aa9□□□□□ -0.97
LCA5-201ENST00000369846 ADD3Q9UEY8 706 aaKnown RBP9□□□□□ -0.97
LCA5-201ENST00000369846 COMMD3-BMI1R4GMX3 469 aa9□□□□□ -0.97
LCA5-201ENST00000369846 HSPA1AP0DMV8 641 aaKnown RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 HSPA1BP0DMV9 641 aaKnown RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 PYGMP11217 842 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 SERPINH1P50454 418 aaKnown RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 CCR3P51677 355 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 CHRNA2Q15822 529 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 ACCSLQ4AC99 568 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 WASHC2DQ5SRD0 308 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 ARHGAP17Q68EM7 881 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 ALKBH8Q96BT7 664 aaKnown RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 NUP85Q9BW27 656 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 PSMC3IPQ9P2W1 217 aaPredicted RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 NXF1Q9UBU9 619 aaKnown RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 KIAA0232Q92628 1395 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 KIDINS220Q9ULH0 1771 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 LRRIQ4A6NIV6 560 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 O00370 1275 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 LAD1O00515 517 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 FKBP6O75344 327 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 TNFAIP8O95379 198 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 TFRCP02786 760 aaKnown RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 GYPCP04921 128 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 CCDC130P13994 396 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 PSMA2P25787 234 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 HADHAP40939 763 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 PASD1Q8IV76 773 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 TERB1Q8NA31 727 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 USP38Q8NB14 1042 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 ATL2Q8NHH9 583 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 PI4K2BQ8TCG2 481 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 DIS3LQ8TF46 1054 aaKnown RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 LENG1Q96BZ8 264 aaPredicted RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 PCMTD2Q9NV79 361 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 HPS5Q9UPZ3 1129 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 SIGLEC1Q9BZZ2 1709 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 PEX1O43933 1283 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 CBFA2T3O75081 653 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 CBX6O95503 412 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 LDHAP00338 332 aaKnown RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 CASP5P51878 434 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 MYBPC2Q14324 1141 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 NR1I3Q14994 352 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 TAF5Q15542 800 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 TRMT5Q32P41 509 aaKnown RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 ZNF394Q53GI3 561 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 COBLL1Q53SF7 1204 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 SDE2Q6IQ49 451 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 GALNT17Q6IS24 598 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 SZRD1Q7Z422 152 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 SLFN12Q8IYM2 578 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 E2F7Q96AV8 911 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 RMND5BQ96G75 393 aaPredicted RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 GCNAQ96QF7 691 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 MPP6Q9NZW5 540 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 PCSK1NQ9UHG2 260 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 NEXMIFQ5QGS0 1516 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 RNF103O00237 685 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 ZNF862O60290 1169 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 ZNF23P17027 643 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 NSUN2Q08J23 767 aaKnown RBP eCLIP8.99□□□□□ -0.97
LCA5-201ENST00000369846 ZMYM1Q5SVZ6 1142 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 RNF220Q5VTB9 566 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 ARL6IP4Q66PJ3 421 aaKnown RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 PPHLN1Q8NEY8 458 aaKnown RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 ZC3H12CQ9C0D7 883 aaKnown RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 C6orf62Q9GZU0 229 aaPredicted RBP8.99□□□□□ -0.97
LCA5-201ENST00000369846 MOSPD1Q9UJG1 213 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 ZFYVE9O95405 1425 aa8.99□□□□□ -0.97
LCA5-201ENST00000369846 PIPSLA2A3N6 862 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 PSTPIP1O43586 416 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 RGS20O76081 388 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 ATXN8OSP0DMR3 200 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 MYL2P10916 166 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 KCNA2P16389 499 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 SOX5P35711 763 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 KCNJ2P63252 427 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 ABATP80404 500 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 DRAP1Q14919 205 aaPredicted RBP8.98□□□□□ -0.97
LCA5-201ENST00000369846 EFHC1Q5JVL4 640 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 MARK2Q7KZI7 788 aaKnown RBP8.98□□□□□ -0.97
LCA5-201ENST00000369846 TRIM69Q86WT6 500 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 COL23A1Q86Y22 540 aaPredicted RBP8.98□□□□□ -0.97
LCA5-201ENST00000369846 TTC13Q8NBP0 860 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 TGFBRAP1Q8WUH2 860 aa8.98□□□□□ -0.97
LCA5-201ENST00000369846 EYA3Q99504 573 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms