RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 CNNM2Q9H8M5 875 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 GTSE1Q9NYZ3 720 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 GABBR1Q9UBS5 961 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 SEC63Q9UGP8 760 aaKnown RBP11.59□□□□□ -0.55
TUBE1-201ENST00000368657 SLC6A14Q9UN76 642 aa11.59□□□□□ -0.55
TUBE1-201ENST00000368657 MYO9AB2RTY4 2548 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 E9PAM4 449 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 ERVH48-1M5A8F1 160 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 ITPKBP27987 946 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 HOXA11P31270 313 aaPredicted RBP11.58□□□□□ -0.56
TUBE1-201ENST00000368657 ELF1P32519 619 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 HOXD12P35452 270 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 ZNF76P36508 570 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 GFPT1Q06210 699 aaPredicted RBP11.58□□□□□ -0.56
TUBE1-201ENST00000368657 HSP90AA2PQ14568 343 aaPredicted RBP11.58□□□□□ -0.56
TUBE1-201ENST00000368657 TMEM196Q5HYL7 178 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 LEMD2Q8NC56 503 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 SMG8Q8ND04 991 aaKnown RBP11.58□□□□□ -0.56
TUBE1-201ENST00000368657 PI4K2AQ9BTU6 479 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 TBC1D22BQ9NU19 505 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 INVSQ9Y283 1065 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 GIT1Q9Y2X7 761 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 COL6A6A6NMZ7 2263 aa11.58□□□□□ -0.56
TUBE1-201ENST00000368657 VWA8A3KMH1 1905 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 TRDMT1O14717 391 aaKnown RBP11.57□□□□□ -0.56
TUBE1-201ENST00000368657 OATP04181 439 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 MLH1P40692 756 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 CCR2P41597 374 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 MFAP1P55081 439 aaKnown RBP11.57□□□□□ -0.56
TUBE1-201ENST00000368657 PLCB2Q00722 1185 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 UBE2SQ16763 222 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 DUOXA1Q1HG43 343 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 ITPRIPL2Q3MIP1 535 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 FBXO43Q4G163 708 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 TAF1BQ53T94 588 aaPredicted RBP11.57□□□□□ -0.56
TUBE1-201ENST00000368657 SPDYCQ5MJ68 293 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 PPP1R15BQ5SWA1 713 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 IQCEQ6IPM2 695 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 PCSK4Q6UW60 755 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 LPCAT2Q7L5N7 544 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 GLRX5Q86SX6 157 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 PLEKHM2Q8IWE5 1019 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 GALNT15Q8N3T1 639 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 TTC8Q8TAM2 541 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 EVI5LQ96CN4 794 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 ZNF512Q96ME7 567 aaPredicted RBP11.57□□□□□ -0.56
TUBE1-201ENST00000368657 GTPBP2Q9BX10 602 aaKnown RBP11.57□□□□□ -0.56
TUBE1-201ENST00000368657 SPZ1Q9BXG8 430 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 DNAAF2Q9NVR5 837 aaKnown RBP11.57□□□□□ -0.56
TUBE1-201ENST00000368657 SUCLA2Q9P2R7 463 aaPredicted RBP11.57□□□□□ -0.56
TUBE1-201ENST00000368657 TCEAL9Q9UHQ7 104 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 IPPQ9Y573 584 aa11.57□□□□□ -0.56
TUBE1-201ENST00000368657 ANKRD17O75179 2603 aaKnown RBP11.56□□□□□ -0.56
TUBE1-201ENST00000368657 ZMYM2Q9UBW7 1377 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 PTPRBP23467 1997 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 PYCARD-AS1I3L0S3 204 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 IPO5O00410 1097 aaKnown RBP11.56□□□□□ -0.56
TUBE1-201ENST00000368657 RRP8O43159 456 aaKnown RBP11.56□□□□□ -0.56
TUBE1-201ENST00000368657 SH3BP5O60239 455 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 RNF40O75150 1001 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 FOSP01100 380 aaPredicted RBP11.56□□□□□ -0.56
TUBE1-201ENST00000368657 EIF2S3P41091 472 aaKnown RBP11.56□□□□□ -0.56
TUBE1-201ENST00000368657 AMPD2Q01433 879 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 DRP2Q13474 957 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 FSTL4Q6MZW2 842 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.56□□□□□ -0.56
TUBE1-201ENST00000368657 SRGAP1Q7Z6B7 1085 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 SLCO6A1Q86UG4 719 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 RHPN2Q8IUC4 686 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 TEX2Q8IWB9 1127 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 HACE1Q8IYU2 909 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 ELMOD1Q8N336 334 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 ZNF461Q8TAF7 563 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 FAM227BQ96M60 508 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 ZFP42Q96MM3 310 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 TMEM74BQ9NUR3 256 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 IL17BQ9UHF5 180 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 BACE2Q9Y5Z0 518 aa11.56□□□□□ -0.56
TUBE1-201ENST00000368657 TDRD15B5MCY1 1934 aaKnown RBP11.56□□□□□ -0.56
TUBE1-201ENST00000368657 IGKV6-21A0A0C4DH24 114 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 DPYSL4O14531 572 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 PRRG1O14668 218 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 MOSPD3O75425 235 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 CFIP05156 583 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 SERPINF2P08697 491 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 C6P13671 934 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 DRD1P21728 446 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 PI4KAP42356 2102 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 GRIK3Q13003 919 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 CAMK2BQ13554 666 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 DMC1Q14565 340 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 TARBP2Q15633 366 aaKnown RBP11.55□□□□□ -0.56
TUBE1-201ENST00000368657 RABEPKQ7Z6M1 372 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 MINDY1Q8N5J2 469 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 EXOC4Q96A65 974 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 ACDQ96AP0 544 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 RSPRY1Q96DX4 576 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 CAMK1GQ96NX5 476 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 SLITRK6Q9H5Y7 841 aa11.55□□□□□ -0.56
TUBE1-201ENST00000368657 IFT122Q9HBG6 1241 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms