RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.43■□□□□ 0.387e-6■■□□□ 13.7
SCAF8-201ENST00000367178 GTF2A2P52657 109 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 SMAD1Q15797 465 aaKnown RBP17.42■□□□□ 0.38
SCAF8-201ENST00000367178 NBPF12Q5TAG4 269 aaPredicted RBP17.42■□□□□ 0.38
SCAF8-201ENST00000367178 FAM8A1Q9UBU6 413 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 KCNN4O15554 427 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 ZNF189O75820 626 aaPredicted RBP17.42■□□□□ 0.38
SCAF8-201ENST00000367178 ATXN8OSP0DMR3 200 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 NOTUMQ6P988 496 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 SARS2Q9NP81 518 aaKnown RBP17.42■□□□□ 0.38
SCAF8-201ENST00000367178 GTSE1Q9NYZ3 720 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 MOSPD1Q9UJG1 213 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 FAM205AQ6ZU69 1335 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 VCAM1P19320 739 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 C9orf131Q5VYM1 1079 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 TRAIPQ9BWF2 469 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 FAM96AQ9H5X1 160 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 GPRC5CQ9NQ84 441 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 RGL2O15211 777 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 PCSK1P29120 753 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 TYK2P29597 1187 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 CPT1AP50416 773 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 KIF19Q2TAC6 998 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 SV2CQ496J9 727 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 GPAT2Q6NUI2 795 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 SYDE1Q6ZW31 735 aaPredicted RBP17.42■□□□□ 0.38
SCAF8-201ENST00000367178 RAPGEF5Q92565 580 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 ATP6V1G3Q96LB4 118 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 FGFR1OP2Q9NVK5 253 aa17.42■□□□□ 0.38
SCAF8-201ENST00000367178 FARP1Q9Y4F1 1045 aaPredicted RBP17.42■□□□□ 0.38
SCAF8-201ENST00000367178 ATP9BO43861 1147 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 E2F5Q15329 346 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 ANKRD20A4Q4UJ75 823 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 ANKRD20A8PQ5CZ79 823 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 ANKRD20A2Q5SQ80 823 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 ANKRD20A1Q5TYW2 823 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 HPSEQ9Y251 543 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 GRAP2O75791 330 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 SESN2P58004 480 aaPredicted RBP17.41■□□□□ 0.38
SCAF8-201ENST00000367178 FAM83AQ86UY5 434 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 SAMD3Q8N6K7 520 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 KBTBD4Q9NVX7 518 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 MAP2P11137 1827 aaKnown RBP17.41■□□□□ 0.38
SCAF8-201ENST00000367178 PHF2O75151 1096 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 MUTP22033 750 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 GTF2H1P32780 548 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 SYN2Q92777 582 aaPredicted RBP17.41■□□□□ 0.38
SCAF8-201ENST00000367178 RMDN1Q96DB5 314 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 HPDLQ96IR7 371 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 SLC13A1Q9BZW2 595 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 E5RI56 91 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 LUC7L3O95232 432 aaKnown RBP17.41■□□□□ 0.38
SCAF8-201ENST00000367178 EPC2Q52LR7 807 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 FBXO41Q8TF61 875 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 ZBTB18Q99592 522 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 AGXT2Q9BYV1 514 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 ZFATQ9P243 1243 aa17.41■□□□□ 0.38
SCAF8-201ENST00000367178 NPTXRO95502 500 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 COMTP21964 271 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 FGFR4P22455 802 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 GJB7Q6PEY0 223 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 ACAD11Q709F0 780 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 TBC1D1Q86TI0 1168 aaPredicted RBP17.4■□□□□ 0.38
SCAF8-201ENST00000367178 RASSF3Q86WH2 238 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 ZNF677Q86XU0 584 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 MYCBPQ99417 103 aaPredicted RBP17.4■□□□□ 0.38
SCAF8-201ENST00000367178 KLRC1P26715 233 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 SREBF2Q12772 1141 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 BEND6Q5SZJ8 279 aaPredicted RBP17.4■□□□□ 0.38
SCAF8-201ENST00000367178 TADA2BQ86TJ2 420 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 TRIM51Q9BSJ1 452 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 ALG6Q9Y672 507 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 GMNCA6NCL1 334 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 NFIBO00712 420 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 KIF3CO14782 793 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 APRTP07741 180 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 SHMT1P34896 483 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 STAT4Q14765 748 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 TERF2Q15554 542 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 OSBPL8Q9BZF1 889 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 FOXP2O15409 715 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 PKN1Q16512 942 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 FSCBQ5H9T9 825 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.4■□□□□ 0.381e-9■□□□□ 10.8
SCAF8-201ENST00000367178 UPF3AQ9H1J1 476 aaKnown RBP17.4■□□□□ 0.38
SCAF8-201ENST00000367178 MROH8Q9H579 483 aa17.4■□□□□ 0.38
SCAF8-201ENST00000367178 ATMINO43313 823 aaPredicted RBP17.39■□□□□ 0.37
SCAF8-201ENST00000367178 UPP2O95045 317 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 PGK2P07205 417 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 SUPT20HL2P0C7V6 817 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 RUBCNQ92622 972 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 ULK4Q96C45 1275 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 GLT1D1Q96MS3 346 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 ZCCHC17Q9NP64 241 aaKnown RBP17.39■□□□□ 0.37
SCAF8-201ENST00000367178 IRAK4Q9NWZ3 460 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 UBA6A0AVT1 1052 aaPredicted RBP17.39■□□□□ 0.37
SCAF8-201ENST00000367178 SPECC1L-ADORA2AF8WAN1 911 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 OGTO15294 1046 aa17.39■□□□□ 0.37
SCAF8-201ENST00000367178 HABP4Q5JVS0 413 aaKnown RBP17.39■□□□□ 0.37
SCAF8-201ENST00000367178 ANKMY2Q8IV38 441 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms