RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 CCNI2Q6ZMN8 369 aaPredicted RBP17.57■□□□□ 0.4
NID1-202ENST00000366595 LRRC1Q9BTT6 524 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 MRPL4Q9BYD3 311 aaKnown RBP17.57■□□□□ 0.4
NID1-202ENST00000366595 SLC40A1Q9NP59 571 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 KRCC1Q9NPI7 259 aaPredicted RBP17.57■□□□□ 0.4
NID1-202ENST00000366595 PNMA3Q9UL41 463 aa17.57■□□□□ 0.4
NID1-202ENST00000366595 H7C0S8 307 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 C17orf80Q9BSJ5 609 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 CAAP1Q9H8G2 361 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 RHBDL2Q9NX52 303 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 ZBTB5O15062 677 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 GDF11O95390 407 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 KCNB1Q14721 858 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 DCAF4L1Q3SXM0 396 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 SYTL3Q4VX76 610 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 NUDT18Q6ZVK8 323 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 SUGP1Q8IWZ8 645 aaKnown RBP17.56■□□□□ 0.4
NID1-202ENST00000366595 TNIP3Q96KP6 325 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 ITGB1BP2Q9UKP3 347 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 ADGRA3Q8IWK6 1321 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 PLEKHG1Q9ULL1 1385 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 IL6STP40189 918 aaPredicted RBP17.56■□□□□ 0.4
NID1-202ENST00000366595 SLC9A5Q14940 896 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 FLCNQ8NFG4 579 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 P4HBP07237 508 aaKnown RBP17.56■□□□□ 0.4
NID1-202ENST00000366595 BTBD8Q5XKL5 378 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 MIGA2Q7L4E1 593 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 GPD1LQ8N335 351 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 SNRNP27Q8WVK2 155 aaKnown RBP17.56■□□□□ 0.4
NID1-202ENST00000366595 OSBP2Q969R2 916 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 SPON2Q9BUD6 331 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 RGL1Q9NZL6 768 aa17.56■□□□□ 0.4
NID1-202ENST00000366595 DENND3A2RUS2 1198 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 ANXA11P50995 505 aaKnown RBP17.55■□□□□ 0.4
NID1-202ENST00000366595 COPAP53621 1224 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 CORO7P57737 925 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 MAPRE1Q15691 268 aaKnown RBP17.55■□□□□ 0.4
NID1-202ENST00000366595 CHMP1BQ7LBR1 199 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 GLYCTKQ8IVS8 523 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 FAR2Q96K12 515 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 CLEC4MQ9H2X3 399 aaPredicted RBP17.55■□□□□ 0.4
NID1-202ENST00000366595 TASP1Q9H6P5 420 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 ALG13Q9NP73 1137 aaKnown RBP17.55■□□□□ 0.4
NID1-202ENST00000366595 DMAP1Q9NPF5 467 aaPredicted RBP17.55■□□□□ 0.4
NID1-202ENST00000366595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.55■□□□□ 0.4
NID1-202ENST00000366595 CTNNAL1Q9UBT7 734 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 CTCFP49711 727 aaPredicted RBP17.55■□□□□ 0.4
NID1-202ENST00000366595 TTC39BQ5VTQ0 682 aaPredicted RBP17.55■□□□□ 0.4
NID1-202ENST00000366595 LVRNQ6Q4G3 990 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 CCDC149Q6ZUS6 474 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 IFNEQ86WN2 208 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 SHCBP1Q8NEM2 672 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 PTPRN2Q92932 1015 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 COQ7Q99807 217 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 TIPINQ9BVW5 301 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 GEMIN8Q9NWZ8 242 aaKnown RBP17.55■□□□□ 0.4
NID1-202ENST00000366595 LIMA1Q9UHB6 759 aaKnown RBP17.55■□□□□ 0.4
NID1-202ENST00000366595 PHF20L1A8MW92 1017 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 TPI1P60174 286 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 ANKMY2Q8IV38 441 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 IL17REQ8NFR9 667 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 SLC7A5P2Q9GIP4 190 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 PLEKHA5Q9HAU0 1116 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 PAK5Q9P286 719 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 SFI1A8K8P3 1242 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 H2AFYO75367 372 aaKnown RBP17.55■□□□□ 0.4
NID1-202ENST00000366595 NCALDP61601 193 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 MDH1BQ5I0G3 518 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 ANKRD40Q6AI12 368 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 NOD2Q9HC29 1040 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 TLR7Q9NYK1 1049 aaKnown RBP17.55■□□□□ 0.4
NID1-202ENST00000366595 NEU2Q9Y3R4 380 aa17.55■□□□□ 0.4
NID1-202ENST00000366595 KCNN4O15554 427 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 CD2BP2O95400 341 aaKnown RBP17.54■□□□□ 0.4
NID1-202ENST00000366595 GRK2P25098 689 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 CDK8P49336 464 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 NCKAP1LP55160 1127 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 SESN2P58004 480 aaPredicted RBP17.54■□□□□ 0.4
NID1-202ENST00000366595 FAM9CQ8IZT9 166 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 RBM46Q8TBY0 533 aaKnown RBP17.54■□□□□ 0.4
NID1-202ENST00000366595 PIGOQ8TEQ8 1089 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 PUS3Q9BZE2 481 aaKnown RBP17.54■□□□□ 0.4
NID1-202ENST00000366595 NDUFS3O75489 264 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 SCP2P22307 547 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 PTK7Q13308 1070 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 PRPF39Q86UA1 669 aaKnown RBP17.54■□□□□ 0.4
NID1-202ENST00000366595 AFG1LQ8WV93 481 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 ITIH6Q6UXX5 1313 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 IGF2BP3O00425 579 aaKnown RBP eCLIP17.54■□□□□ 0.44e-8■■■■□ 21.3
NID1-202ENST00000366595 E2F7Q96AV8 911 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 DEPDC7Q96QD5 511 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 PUS7LQ9H0K6 701 aaKnown RBP17.54■□□□□ 0.4
NID1-202ENST00000366595 SLC18A3Q16572 532 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 OMA1Q96E52 524 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 ELMO2Q96JJ3 720 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 SPATA16Q9BXB7 569 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 FAM49AQ9H0Q0 323 aaPredicted RBP17.54■□□□□ 0.4
NID1-202ENST00000366595 SMARCAD1Q9H4L7 1026 aa17.54■□□□□ 0.4
NID1-202ENST00000366595 PDXKO00764 312 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms