RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 OR1G1P47890 313 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 ST8SIA6P61647 398 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 THEMIS2Q5TEJ8 643 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 DACT3Q96B18 629 aaPredicted RBP10.87□□□□□ -0.67
ZNF548-202ENST00000366197 SLC13A1Q9BZW2 595 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 NIF3L1Q9GZT8 377 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 AP3B1O00203 1094 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 DNAJC6O75061 913 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 YY1P25490 414 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 GCLCP48506 637 aaPredicted RBP10.87□□□□□ -0.67
ZNF548-202ENST00000366197 TBC1D1Q86TI0 1168 aaPredicted RBP10.87□□□□□ -0.67
ZNF548-202ENST00000366197 NUDCD3Q8IVD9 361 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 TRPC7Q9HCX4 862 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 FAM49BQ9NUQ9 324 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 SNX12Q9UMY4 172 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 RRP15Q9Y3B9 282 aaKnown RBP10.87□□□□□ -0.67
ZNF548-202ENST00000366197 SPATA31D1Q6ZQQ2 1576 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 STMN1P16949 149 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 ACADSBP45954 432 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 FCGRTP55899 365 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 KRT17Q04695 432 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 FASTKD1Q53R41 847 aaKnown RBP10.87□□□□□ -0.67
ZNF548-202ENST00000366197 RNF135Q8IUD6 432 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 SLC35G2Q8TBE7 412 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 AGAP3Q96P47 875 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 AIPL1Q9NZN9 384 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 MAD2L2Q9UI95 211 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 FHOD1Q9Y613 1164 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 PLSCR1O15162 318 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 FOXP2O15409 715 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 MSH4O15457 936 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 KCNN4O15554 427 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 EXTL3O43909 919 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 ANP32DO95626 131 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 APRTP07741 180 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 FXR1P51114 621 aaKnown RBP eCLIP10.87□□□□□ -0.67
ZNF548-202ENST00000366197 CXCL9Q07325 125 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 LRRC43Q8N309 656 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 FHDC1Q9C0D6 1143 aaPredicted RBP10.87□□□□□ -0.67
ZNF548-202ENST00000366197 ZNF212Q9UDV6 495 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 TRIM33Q9UPN9 1127 aa10.87□□□□□ -0.67
ZNF548-202ENST00000366197 GYG2O15488 501 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 WEE2P0C1S8 567 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 RGS2P41220 211 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 DEUP1Q05D60 604 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 MGAT5BQ3V5L5 792 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 PDLIM2Q96JY6 352 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 SLITRK1Q96PX8 696 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 MLXIPLQ9NP71 852 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 ADAM21Q9UKJ8 722 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 L3MBTL1Q9Y468 752 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 NRXN1Q9ULB1 1477 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 HMBSP08397 361 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 E2F5Q15329 346 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 ANO4Q32M45 955 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 MTHFD1LQ6UB35 978 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 PABPC5Q96DU9 382 aaKnown RBP10.86□□□□□ -0.67
ZNF548-202ENST00000366197 CYTH2Q99418 400 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 MROH8Q9H579 483 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.86□□□□□ -0.67
ZNF548-202ENST00000366197 ITIH6Q6UXX5 1313 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 CTDNEP1O95476 244 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 SKIP12755 728 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 EEF1B2P24534 225 aaKnown RBP10.86□□□□□ -0.67
ZNF548-202ENST00000366197 PTK2BQ14289 1009 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 LBRQ14739 615 aaKnown RBP10.86□□□□□ -0.67
ZNF548-202ENST00000366197 NCAPHQ15003 741 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 SNX17Q15036 470 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 NAB2Q15742 525 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 LCA5Q86VQ0 697 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 GSPT2Q8IYD1 628 aaKnown RBP10.86□□□□□ -0.67
ZNF548-202ENST00000366197 DAGLBQ8NCG7 672 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 STKLD1Q8NE28 680 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 HIPK4Q8NE63 616 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 NCLNQ969V3 563 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 HPDLQ96IR7 371 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 SEPT5Q99719 369 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-202ENST00000366197 RAB6BQ9NRW1 208 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 AFF4Q9UHB7 1163 aaKnown RBP10.86□□□□□ -0.67
ZNF548-202ENST00000366197 HPS5Q9UPZ3 1129 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 PRG3Q9Y2Y8 225 aaPredicted RBP10.86□□□□□ -0.67
ZNF548-202ENST00000366197 CFAP69A5D8W1 941 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 GGCXP38435 758 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 PNPLA4P41247 253 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 TRMT10CQ7L0Y3 403 aaKnown RBP10.86□□□□□ -0.67
ZNF548-202ENST00000366197 TXNRD3Q86VQ6 643 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 CNPY4Q8N129 248 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 DCUN1D1Q96GG9 259 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 MCEEQ96PE7 176 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 TMEM117Q9H0C3 514 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 THEGQ9P2T0 379 aa10.86□□□□□ -0.67
ZNF548-202ENST00000366197 USP27XA6NNY8 438 aa10.85□□□□□ -0.67
ZNF548-202ENST00000366197 DIAPH2O60879 1101 aa10.85□□□□□ -0.67
ZNF548-202ENST00000366197 INPP1P49441 399 aa10.85□□□□□ -0.67
ZNF548-202ENST00000366197 PPP2R2AP63151 447 aa10.85□□□□□ -0.67
ZNF548-202ENST00000366197 CDR2Q01850 454 aa10.85□□□□□ -0.67
ZNF548-202ENST00000366197 PDE1CQ14123 709 aaPredicted RBP10.85□□□□□ -0.67
ZNF548-202ENST00000366197 STAT4Q14765 748 aa10.85□□□□□ -0.67
ZNF548-202ENST00000366197 NR1I3Q14994 352 aa10.85□□□□□ -0.67
ZNF548-202ENST00000366197 SMAD1Q15797 465 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms