RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 LENG9Q96B70 501 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 NUP88Q99567 741 aaPredicted RBP4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 TMPRSS5Q9H3S3 457 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 ZNF180Q9UJW8 692 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 ING1Q9UK53 422 aaPredicted RBP4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 FZD1Q9UP38 647 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 FPGT-TNNI3KV9GXZ4 949 aa4.2□□□□□ -1.74
RNU4-48P-201ENST00000365559 AATKQ6ZMQ8 1374 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 CENPVL1A0A0U1RR11 272 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 A0A1B0GTW7 788 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 GAGE12BA1L429 117 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 GAGE12HA6NDE8 117 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 MARCH11A6NNE9 402 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 CFIP05156 583 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 RPLP2P05387 115 aaKnown RBP4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 CT47B1P0C2W7 299 aaPredicted RBP4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 ALAS1P13196 640 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 LAG3P18627 525 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 MAKP20794 623 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 MALP21145 153 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 AKAP5P24588 427 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 MCM7P33993 719 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 PTGS2P35354 604 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 GDF5P43026 501 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 OCA2Q04671 838 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 SLFN5Q08AF3 891 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 ABHD18Q0P651 414 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 ZNF267Q14586 743 aaPredicted RBP4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 ATP2B3Q16720 1220 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 PABPC1LQ4VXU2 614 aaKnown RBP4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 TIGD2Q4W5G0 525 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 TPH2Q8IWU9 490 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 ANKRD13AQ8IZ07 590 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 FITM2Q8N6M3 262 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 CPEB3Q8NE35 698 aaKnown RBP4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 IL17RDQ8NFM7 739 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 TBC1D15Q8TC07 691 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 LARP4BQ92615 738 aaKnown RBP4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 MYEOVQ96EZ4 313 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 MARS2Q96GW9 593 aaKnown RBP4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 KRTAP4-2Q9BYR5 136 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 CDH19Q9H159 772 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 ZIM2Q9NZV7 527 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 DKK2Q9UBU2 259 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 USP25Q9UHP3 1055 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 SLC45A2Q9UMX9 530 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 ATP11BQ9Y2G3 1177 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 PCDHA3Q9Y5H8 950 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 HS3ST4Q9Y661 456 aa4.19□□□□□ -1.74
RNU4-48P-201ENST00000365559 E2F8A0AVK6 867 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 UNC119BA6NIH7 251 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 TMEM200CA6NKL6 621 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 NT5C1B-RDH14C9J2C7 533 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 F2RL2O00254 374 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 DTNBO60941 627 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 SLC43A1O75387 559 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 HAUS5O94927 633 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 ABHD16AO95870 558 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 SLPIP03973 132 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 S100BP04271 92 aaPredicted RBP4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 SPATA31D3P0C874 917 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 MTHFD1P11586 935 aaKnown RBP4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 CKBP12277 381 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 FGFR4P22455 802 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 MAP2K6P52564 334 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 NOGQ13253 232 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 LRRC41Q15345 812 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 PGS1Q32NB8 556 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 UTP14CQ5TAP6 766 aaKnown RBP4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 B3GNTL1Q67FW5 361 aaPredicted RBP4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 SPATA31D4Q6ZUB0 917 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 ZNF627Q7L945 461 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 MAPKAPK5Q8IW41 473 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 SYNE4Q8N205 404 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 C3orf20Q8ND61 904 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 NLGN4YQ8NFZ3 816 aaPredicted RBP4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 PROKR1Q8TCW9 393 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 NEU4Q8WWR8 484 aaPredicted RBP4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 HPS3Q969F9 1004 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 RGMAQ96B86 450 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 MVB12AQ96EY5 273 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 ADAM2Q99965 735 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 PACSIN1Q9BY11 444 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 REXO4Q9GZR2 422 aaKnown RBP4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 SLC12A5Q9H2X9 1139 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 RNPEPQ9H4A4 650 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 JKAMPQ9P055 326 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 ANKFY1Q9P2R3 1169 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 HSFX1Q9UBD0 423 aa4.18□□□□□ -1.74
RNU4-48P-201ENST00000365559 AGFG2O95081 481 aa4.17□□□□□ -1.74
RNU4-48P-201ENST00000365559 FTLP02792 175 aaPredicted RBP4.17□□□□□ -1.74
RNU4-48P-201ENST00000365559 ADH4P08319 380 aa4.17□□□□□ -1.74
RNU4-48P-201ENST00000365559 FCER1AP12319 257 aa4.17□□□□□ -1.74
RNU4-48P-201ENST00000365559 VCAM1P19320 739 aa4.17□□□□□ -1.74
RNU4-48P-201ENST00000365559 DDX6P26196 483 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNU4-48P-201ENST00000365559 BMPR1AP36894 532 aa4.17□□□□□ -1.74
RNU4-48P-201ENST00000365559 HK3P52790 923 aa4.17□□□□□ -1.74
RNU4-48P-201ENST00000365559 HSD11B2P80365 405 aa4.17□□□□□ -1.74
RNU4-48P-201ENST00000365559 RESTQ13127 1097 aa4.17□□□□□ -1.74
RNU4-48P-201ENST00000365559 ATAT1Q5SQI0 421 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms