RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 RNF181Q9P0P0 153 aa3.43□□□□□ -1.86
RNU6-428P-201ENST00000362942 CFAP97Q9P2B7 532 aa3.43□□□□□ -1.86
RNU6-428P-201ENST00000362942 THRAP3Q9Y2W1 955 aaKnown RBP3.43□□□□□ -1.86
RNU6-428P-201ENST00000362942 NEU2Q9Y3R4 380 aa3.43□□□□□ -1.86
RNU6-428P-201ENST00000362942 PCDHB1Q9Y5F3 818 aa3.43□□□□□ -1.86
RNU6-428P-201ENST00000362942 GRM6O15303 877 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 AP1G1O43747 822 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 RPS6KA4O75676 772 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 CD1AP06126 327 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 CKBP12277 381 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 LAG3P18627 525 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 MAKP20794 623 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 MALP21145 153 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 APOBEC3AP31941 199 aaPredicted RBP3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 FXR1P51114 621 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 CHN2P52757 468 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 HK3P52790 923 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 DSC2Q02487 901 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 NOGQ13253 232 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 TOB2Q14106 344 aaPredicted RBP3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 MLC1Q15049 377 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 LSM12Q3MHD2 195 aaKnown RBP3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 UBE3BQ7Z3V4 1068 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 DENND1CQ8IV53 801 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 TPH2Q8IWU9 490 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 ZNF276Q8N554 614 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 BRIX1Q8TDN6 353 aaKnown RBP3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 DIS3LQ8TF46 1054 aaKnown RBP3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 HAS1Q92839 578 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 LRGUKQ96M69 825 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 MED15Q96RN5 788 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 GSTO2Q9H4Y5 243 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 BRD9Q9H8M2 597 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 SARS2Q9NP81 518 aaKnown RBP3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 C1orf112Q9NSG2 853 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 LMBRD1Q9NUN5 540 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 PNPOQ9NVS9 261 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 JKAMPQ9P055 326 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 CEP72Q9P209 647 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 KLHL42Q9P2K6 505 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 SLC23A1Q9UHI7 598 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 ZDHHC8Q9ULC8 765 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 STXBP5LQ9Y2K9 1186 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 USP15Q9Y4E8 981 aaPredicted RBP3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 NOX1Q9Y5S8 564 aa3.42□□□□□ -1.86
RNU6-428P-201ENST00000362942 TCRBV7S2A1N4TA0A589 114 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 H3BML4 177 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 TSPAN6O43657 245 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 CTNND1O60716 968 aaKnown RBP3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 FAM20BO75063 409 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 SLC43A1O75387 559 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 ERN1O75460 977 aaKnown RBP3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 CHEK2O96017 543 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 GNAI2P04899 355 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 ITGB1P05556 798 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 LPOP22079 712 aaPredicted RBP3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 GCSHP23434 173 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 MCM7P33993 719 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 ZNF280AP59817 542 aaPredicted RBP3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 RNASE9P60153 205 aaKnown RBP3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 PIGFQ07326 219 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 SNAPC2Q13487 334 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 PUM1Q14671 1186 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 FLYWCH1Q4VC44 716 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 TIGD2Q4W5G0 525 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 LY6G5CQ5SRR4 150 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 AGAP9Q5VTM2 703 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 TSHZ3Q63HK5 1081 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 PPP4R4Q6NUP7 873 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 ZNF365Q70YC5 407 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 HEATR3Q7Z4Q2 680 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 SPRED1Q7Z699 444 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 DAAM2Q86T65 1068 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 PDSS2Q86YH6 399 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 FAM43AQ8N2R8 423 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 MAGEB6Q8N7X4 407 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 SLC35G2Q8TBE7 412 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 TBC1D15Q8TC07 691 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 ZNF483Q8TF39 744 aaPredicted RBP3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 CACTINQ8WUQ7 758 aaKnown RBP3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 DDX17Q92841 729 aaKnown RBP3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 RAB24Q969Q5 203 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 ZNF503Q96F45 646 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 VRK1Q99986 396 aaPredicted RBP3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 FAM204AQ9H8W3 233 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 PRDM11Q9NQV5 511 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 ABCF2Q9UG63 623 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 NOB1Q9ULX3 412 aaKnown RBP3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 FZD1Q9UP38 647 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 REXO2Q9Y3B8 237 aaKnown RBP3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 PCDHA3Q9Y5H8 950 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 FPGT-TNNI3KV9GXZ4 949 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 PNPLA7Q6ZV29 1317 aa3.41□□□□□ -1.86
RNU6-428P-201ENST00000362942 KRTAP9-7A8MTY7 169 aa3.4□□□□□ -1.87
RNU6-428P-201ENST00000362942 H3BUI4 141 aa3.4□□□□□ -1.87
RNU6-428P-201ENST00000362942 LEFTY2O00292 366 aa3.4□□□□□ -1.87
RNU6-428P-201ENST00000362942 FZD7O75084 574 aa3.4□□□□□ -1.87
RNU6-428P-201ENST00000362942 GPANK1O95872 356 aa3.4□□□□□ -1.87
RNU6-428P-201ENST00000362942 ADH4P08319 380 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms