RNA–Protein interactions for RNA: ENST00000362552.1

VTRNA3-1P-201, Transcript of vault RNA 3-1, pseudogene, humanhuman

BASIC

Gene VTRNA3-1P, Length 102 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTRNA3-1P-201ENST00000362552 MYH11P35749 1972 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 CASTOR2A6NHX0 329 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 LRRIQ3A6PVS8 624 aaPredicted RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 GRXCR1A8MXD5 290 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 PODXLO00592 558 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 PTGESO14684 152 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 NRP1O14786 923 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 CBFA2T2O43439 604 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 B3GAT3O94766 335 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 DDHD2O94830 711 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 C4BPAP04003 597 aaKnown RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 ITGB3P05106 788 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 GALTP07902 379 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 NFICP08651 508 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 TRIM49P0CI25 452 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 TRIM49CP0CI26 452 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 TRIM21P19474 475 aaKnown RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 LRPAP1P30533 357 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 ATICP31939 592 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 PPM1AP35813 382 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 BMPR1AP36894 532 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 TAF6P49848 677 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 MXI1P50539 228 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 SMAD3P84022 425 aaKnown RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 ELAVL2Q12926 359 aaKnown RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 IQCB1Q15051 598 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 ZBTB6Q15916 424 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 SGSM1Q2NKQ1 1148 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 UVSSAQ2YD98 709 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 SV2CQ496J9 727 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 C9orf57Q5W0N0 161 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 LMBRD2Q68DH5 695 aaPredicted RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 KIAA1841Q6NSI8 718 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 KCNT2Q6UVM3 1135 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 SV2AQ7L0J3 742 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 TRAPPC11Q7Z392 1133 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 METTL23Q86XA0 190 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 ZNF280BQ86YH2 543 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 COLGALT2Q8IYK4 626 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 GSTCDQ8NEC7 633 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 TAF4BQ92750 862 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 C18orf25Q96B23 403 aaPredicted RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 TIFAQ96CG3 184 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 BORCS6Q96GS4 357 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 FAM81BQ96LP2 452 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 ZMAT2Q96NC0 199 aaKnown RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 MED15Q96RN5 788 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 TGS1Q96RS0 853 aaKnown RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 PLVAPQ9BX97 442 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 MTMR12Q9C0I1 747 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 VPS16Q9H269 839 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 LIMA1Q9UHB6 759 aaKnown RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 COLQQ9Y215 455 aaPredicted RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 SSX2IPQ9Y2D8 614 aa7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 PRG3Q9Y2Y8 225 aaPredicted RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 MRPL42Q9Y6G3 142 aaKnown RBP7.13□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 PIRO00625 290 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 HUS1O60921 280 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 CA3P07451 260 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 POLR2BP30876 1174 aaKnown RBP7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 CTNNB1P35222 781 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 PIK3CAP42336 1068 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 SLC11A1P49279 550 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 FMO5P49326 533 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 CLCNKBP51801 687 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 AFF1P51825 1210 aaKnown RBP7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 COPB1P53618 953 aaKnown RBP7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 UBASH3AP57075 661 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 TNNC1P63316 161 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 DLG4P78352 724 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 CLDN10P78369 228 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 FANCCQ00597 558 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 MYL7Q01449 175 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 UBXN1Q04323 297 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 DSC1Q08554 894 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 NCOA4Q13772 614 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 NCAPHQ15003 741 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 KRT31Q15323 416 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 UPP1Q16831 310 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 LRIT3Q3SXY7 679 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 ZACNQ401N2 412 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 ZNF667Q5HYK9 610 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 CDKAL1Q5VV42 579 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 PPP2R2DQ66LE6 453 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 GBP6Q6ZN66 633 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 IRF2BP1Q8IU81 584 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 TRIM59Q8IWR1 403 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 EFCAB13Q8IY85 973 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 THEM5Q8N1Q8 247 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 LRRC52Q8N7C0 313 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 COLGALT1Q8NBJ5 622 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 EHBP1Q8NDI1 1231 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 FBXL13Q8NEE6 735 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 APPL2Q8NEU8 664 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 OR5B17Q8NGF7 314 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 SP7Q8TDD2 431 aaPredicted RBP7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 MICAL1Q8TDZ2 1067 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 ZNF516Q92618 1163 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 SLC35C1Q96A29 364 aa7.12□□□□□ -1.27
VTRNA3-1P-201ENST00000362552 HPDLQ96IR7 371 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms