RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
VAMP1-201ENST00000361716 MKRN3Q13064 507 aaKnown RBP13.47□□□□□ -0.25
VAMP1-201ENST00000361716 SYT2Q8N9I0 419 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-201ENST00000361716 DAGLBQ8NCG7 672 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 MAML1Q92585 1016 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 CLPTM1LQ96KA5 538 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 TRAPPC9Q96Q05 1148 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 ZNF184Q99676 751 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-201ENST00000361716 ROPN1BQ9BZX4 212 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-201ENST00000361716 ROPN1Q9HAT0 212 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-201ENST00000361716 CD209Q9NNX6 404 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 ARL8BQ9NVJ2 186 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 GGA1Q9UJY5 639 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 TTC4O95801 387 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 HLA-DOAP06340 250 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 PLS3P13797 630 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 RPA3P35244 121 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-201ENST00000361716 PTGIRP43119 386 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 SF3B3Q15393 1217 aaKnown RBP13.47□□□□□ -0.25
VAMP1-201ENST00000361716 DAB2IPQ5VWQ8 1189 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 ST13P4Q8IZP2 240 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-201ENST00000361716 GRAMD1AQ96CP6 724 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 HAUS1Q96CS2 278 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 ANKRD27Q96NW4 1050 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 PDP2Q9P2J9 529 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 ATXN10Q9UBB4 475 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 PRKAG3Q9UGI9 489 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 SERPINB13Q9UIV8 391 aa13.47□□□□□ -0.25
VAMP1-201ENST00000361716 CICQ96RK0 1608 aaPredicted RBP13.47□□□□□ -0.25
VAMP1-201ENST00000361716 MYH14Q7Z406 1995 aaKnown RBP13.47□□□□□ -0.25
VAMP1-201ENST00000361716 E7ENQ6 273 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 H3BRJ5 948 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 CDH16O75309 829 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 ZNF189O75820 626 aaPredicted RBP13.46□□□□□ -0.25
VAMP1-201ENST00000361716 OR6B1O95007 311 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 ENO1P06733 434 aaKnown RBP13.46□□□□□ -0.25
VAMP1-201ENST00000361716 FGRP09769 529 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 T-ENOLP0DO92 83 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 CCNG1P51959 295 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 ARHGAP4P98171 946 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 PDIA5Q14554 519 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 SLFN13Q68D06 897 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 LVRNQ6Q4G3 990 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 TRMT10CQ7L0Y3 403 aaKnown RBP13.46□□□□□ -0.25
VAMP1-201ENST00000361716 ZDHHC14Q8IZN3 488 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 CCDC124Q96CT7 223 aaKnown RBP13.46□□□□□ -0.25
VAMP1-201ENST00000361716 DTNBP1Q96EV8 351 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 FNBP1Q96RU3 617 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 LARSQ9P2J5 1176 aaKnown RBP13.46□□□□□ -0.25
VAMP1-201ENST00000361716 FOXN3O00409 490 aaPredicted RBP13.46□□□□□ -0.25
VAMP1-201ENST00000361716 CCDC22O60826 627 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 KITP10721 976 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 ATP6V1B1P15313 513 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 AMPD1P23109 780 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 SOX5P35711 763 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 MYL7Q01449 175 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 PKN2Q16513 984 aaKnown RBP13.46□□□□□ -0.25
VAMP1-201ENST00000361716 TRAPPC3LQ5T215 181 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 RASSF3Q86WH2 238 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 MIPOL1Q8TD10 442 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 SEC14L1Q92503 715 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 THTPAQ9BU02 230 aa13.46□□□□□ -0.25
VAMP1-201ENST00000361716 ABCB11O95342 1321 aa13.46□□□□□ -0.26
VAMP1-201ENST00000361716 CIB2O75838 187 aa13.46□□□□□ -0.26
VAMP1-201ENST00000361716 IFNB1P01574 187 aa13.46□□□□□ -0.26
VAMP1-201ENST00000361716 VCAM1P19320 739 aa13.46□□□□□ -0.26
VAMP1-201ENST00000361716 FAM182AQ5T1J6 154 aa13.46□□□□□ -0.26
VAMP1-201ENST00000361716 MAP7D3Q8IWC1 876 aa13.46□□□□□ -0.26
VAMP1-201ENST00000361716 PRPF31Q8WWY3 499 aaKnown RBP13.46□□□□□ -0.26
VAMP1-201ENST00000361716 MIPEPQ99797 713 aa13.46□□□□□ -0.26
VAMP1-201ENST00000361716 CHST7Q9NS84 486 aa13.46□□□□□ -0.26
VAMP1-201ENST00000361716 NINJ2Q9NZG7 142 aa13.46□□□□□ -0.26
VAMP1-201ENST00000361716 PPP1R11O60927 126 aaPredicted RBP13.45□□□□□ -0.26
VAMP1-201ENST00000361716 GAS8O95995 478 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 CHRNB2P17787 502 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 PSMC2P35998 433 aaKnown RBP13.45□□□□□ -0.26
VAMP1-201ENST00000361716 BPIFB4P59827 614 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 GPSM2P81274 684 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 CETN1Q12798 172 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 C1orf146Q5VVC0 180 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 KBTBD2Q8IY47 623 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 RNF168Q8IYW5 571 aaPredicted RBP13.45□□□□□ -0.26
VAMP1-201ENST00000361716 RFWD2Q8NHY2 731 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 PRR11Q96HE9 360 aaPredicted RBP13.45□□□□□ -0.26
VAMP1-201ENST00000361716 CLMNQ96JQ2 1002 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 ZWILCHQ9H900 591 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 B2RBV5 119 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 ZBTB5O15062 677 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 TMEM253P0C7T8 217 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 SKIV2L2P42285 1042 aaKnown RBP13.45□□□□□ -0.26
VAMP1-201ENST00000361716 ASPRV1Q53RT3 343 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 SLFN11Q7Z7L1 901 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 LCA5Q86VQ0 697 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 SLC13A5Q86YT5 568 aaPredicted RBP13.45□□□□□ -0.26
VAMP1-201ENST00000361716 PIP4K2CQ8TBX8 421 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 KAT5Q92993 513 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 ZNF653Q96CK0 615 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 PLEKHG4BQ96PX9 1271 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 SPATA16Q9BXB7 569 aa13.45□□□□□ -0.26
VAMP1-201ENST00000361716 KLHL11Q9NVR0 708 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms