RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 HDAC6Q9UBN7 1215 aa8.81□□□□□ -1
NCKAP1-202ENST00000361354 MTMR6Q9Y217 621 aa8.81□□□□□ -1
NCKAP1-202ENST00000361354 ARF5P84085 180 aa8.81□□□□□ -1
NCKAP1-202ENST00000361354 DDR2Q16832 855 aa8.81□□□□□ -1
NCKAP1-202ENST00000361354 CYP4Z1Q86W10 505 aa8.81□□□□□ -1
NCKAP1-202ENST00000361354 CACTIN-AS1Q8N1I8 211 aa8.81□□□□□ -1
NCKAP1-202ENST00000361354 CLIC4Q9Y696 253 aa8.81□□□□□ -1
NCKAP1-202ENST00000361354 AIM2O14862 343 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 DDB1Q16531 1140 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 LRRC24Q50LG9 513 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 DGKHQ86XP1 1220 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 AFG1LQ8WV93 481 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 ATP6V1HQ9UI12 483 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TPRP12270 2363 aaKnown RBP8.8□□□□□ -1
NCKAP1-202ENST00000361354 SPAG17Q6Q759 2223 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.8□□□□□ -1
NCKAP1-202ENST00000361354 BNIPLQ7Z465 357 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 RFT1Q96AA3 541 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 MAN1C1Q9NR34 630 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 CLIC2O15247 247 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 DYNC1LI2O43237 492 aaPredicted RBP8.8□□□□□ -1
NCKAP1-202ENST00000361354 SEC24BO95487 1268 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TCN1P20061 433 aaPredicted RBP8.8□□□□□ -1
NCKAP1-202ENST00000361354 OSBPP22059 807 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 GSTA3Q16772 222 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 KLHL4Q9C0H6 718 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 NOS1P29475 1434 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 SERPINB9P50453 376 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 CLIC6Q96NY7 704 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 MXD3Q9BW11 206 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 FAM47AQ5JRC9 791 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 AP5M1Q9H0R1 490 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 POLR1BQ9H9Y6 1135 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TRIM43BA6NCK2 446 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 STX11O75558 287 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 MTFR1Q15390 333 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 EIF2S3LQ2VIR3 472 aaKnown RBP8.8□□□□□ -1
NCKAP1-202ENST00000361354 KRT28Q7Z3Y7 464 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 NDST4Q9H3R1 872 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 ARHGEF6Q15052 776 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 ZNF667Q5HYK9 610 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 MFSD14BQ5SR56 506 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 GADL1Q6ZQY3 521 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 CCT8L2Q96SF2 557 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 DDX50Q9BQ39 737 aaKnown RBP8.8□□□□□ -1
NCKAP1-202ENST00000361354 TSR3Q9UJK0 312 aaKnown RBP8.8□□□□□ -1
NCKAP1-202ENST00000361354 GCC2Q8IWJ2 1684 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 KANSL1LA0AUZ9 987 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 A8MXQ7 604 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 E9PBE3 544 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 IDH3BO43837 385 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TNFAIP2Q03169 654 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 MAPK11Q15759 364 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 NMRK1Q9NWW6 199 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 MAN1B1Q9UKM7 699 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TRPC5OSA6NMA1 111 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 EDRF1Q3B7T1 1238 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TRAPPC3LQ5T215 181 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 IFNEQ86WN2 208 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 SGSM3Q96HU1 749 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TRIM49BA6NDI0 452 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TRIM49D1C9J1S8 452 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 S100GP29377 79 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 NRG3P56975 720 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TCEAL5Q5H9L2 206 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 CNTN1Q12860 1018 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 C8orf58Q8NAV2 365 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 METTL22Q9BUU2 404 aaPredicted RBP8.8□□□□□ -1
NCKAP1-202ENST00000361354 V9GYQ6 96 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 CHP2O43745 196 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 FGFR4P22455 802 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 SLC39A14Q15043 492 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 DLGAP5Q15398 846 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 ZNF57Q68EA5 555 aaPredicted RBP8.8□□□□□ -1
NCKAP1-202ENST00000361354 F8W810 466 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 ABRAXAS1Q6UWZ7 409 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 PLBD2Q8NHP8 589 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 AMNQ9BXJ7 453 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 COMMD9Q9P000 198 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TMCC3Q9ULS5 477 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 IGF2BP3O00425 579 aaKnown RBP eCLIP8.8□□□□□ -1
NCKAP1-202ENST00000361354 STARP49675 285 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 GPC5P78333 572 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 ANKRD40Q6AI12 368 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TRIM65Q6PJ69 517 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 CTTNBP2Q8WZ74 1663 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TNKSO95271 1327 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 KCTD2Q14681 263 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 ULK3Q6PHR2 472 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 TRIM72Q6ZMU5 477 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 LCORLQ8N3X6 602 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 AATKQ6ZMQ8 1374 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 SPAG6O75602 509 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 CERKLQ49MI3 558 aaPredicted RBP8.8□□□□□ -1
NCKAP1-202ENST00000361354 B3GALT6Q96L58 329 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 MARCOQ9UEW3 520 aaPredicted RBP8.8□□□□□ -1
NCKAP1-202ENST00000361354 PKP3Q9Y446 797 aa8.8□□□□□ -1
NCKAP1-202ENST00000361354 KIF20BQ96Q89 1820 aa8.79□□□□□ -1
NCKAP1-202ENST00000361354 SERPIND1P05546 499 aa8.79□□□□□ -1
NCKAP1-202ENST00000361354 YWHAZP63104 245 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms