RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 SLC7A3Q8WY07 619 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 EMID1Q96A84 441 aaPredicted RBP13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 HES6Q96HZ4 224 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 AP5M1Q9H0R1 490 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 DDX47Q9H0S4 455 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 THSD7BQ9C0I4 1608 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 KRIT1O00522 736 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 DAPK3O43293 454 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 GJB1P08034 283 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 INSRRP14616 1297 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 UCHL3P15374 230 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 ELF1P32519 619 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 MAP2K1Q02750 393 aaPredicted RBP13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 GKAP1Q5VSY0 366 aaPredicted RBP13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 ALKBH5Q6P6C2 394 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 NT5DC3Q86UY8 548 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 SYCE1Q8N0S2 351 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 FIZ1Q96SL8 496 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 PPP1R16BQ96T49 567 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 AP1M1Q9BXS5 423 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 NIFKQ9BYG3 293 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 POLR3FQ9H1D9 316 aaPredicted RBP13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 LARSQ9P2J5 1176 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 TPX2Q9ULW0 747 aaKnown RBP13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 TRAF3IP3Q9Y228 551 aa13.59□□□□□ -0.23
RTFDC1-202ENST00000357348 ZBTB42B2RXF5 422 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 NUDT17P0C025 328 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 GAP43P17677 238 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 ZNF131P52739 623 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 JAM2P57087 298 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 MAGOHP61326 146 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 ARID5AQ03989 594 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 ADAM9Q13443 819 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 OLIG1Q8TAK6 271 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 UBLCP1Q8WVY7 318 aaPredicted RBP13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 MAGOHBQ96A72 148 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 ZNF317Q96PQ6 595 aaPredicted RBP13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 FAM129AQ9BZQ8 928 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 TRIP12Q14669 1992 aaPredicted RBP13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 A6NJR5 290 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 DCDC2CA8MYV0 355 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 CETN3O15182 167 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 GFPT2O94808 682 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 GSTA1P08263 222 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 ITGA4P13612 1032 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 PLS3P13797 630 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 HOXD13P35453 343 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 TARBP2Q15633 366 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 ZNF720Q7Z2F6 126 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 GIMAP7Q8NHV1 300 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 CHMP6Q96FZ7 201 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 FAM167AQ96KS9 214 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 XPO6Q96QU8 1125 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 CENPHQ9H3R5 247 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 DHX33Q9H6R0 707 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 PDLIM7Q9NR12 457 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 OLFML3Q9NRN5 406 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 HAUS2Q9NVX0 235 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 AMACRQ9UHK6 382 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 USP20Q9Y2K6 914 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 CEP83Q9Y592 693 aa13.58□□□□□ -0.24
RTFDC1-202ENST00000357348 MKI67P46013 3256 aaKnown RBP13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 TULP1O00294 542 aaPredicted RBP13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 CLIC2O15247 247 aa13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 SLC9A1P19634 815 aa13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 PON1P27169 355 aa13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 DHX9Q08211 1270 aaKnown RBP13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 GNASQ5JWF2 1037 aa13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 TLDC1Q6P9B6 456 aa13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 PEX26Q7Z412 305 aa13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 SH3TC2Q8TF17 1288 aa13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 EPB41L4BQ9H329 900 aa13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 GOLPH3Q9H4A6 298 aa13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 SIX2Q9NPC8 291 aa13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 SAGE1Q9NXZ1 904 aa13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 PTCH2Q9Y6C5 1203 aa13.57□□□□□ -0.24
RTFDC1-202ENST00000357348 TISP43B9A030 160 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 ASAP2O43150 1006 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 TTI1O43156 1089 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 SEPT4O43236 478 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 HBP1O60381 514 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 AFPP02771 609 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 H2AFZP0C0S5 128 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 ACTN1P12814 892 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 NR2F2P24468 414 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 SLC8A1P32418 973 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 NPTX2P47972 431 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 CLCN3P51790 818 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 DMP1Q13316 513 aaPredicted RBP13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 ITIH4Q14624 930 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 PPP2R5EQ16537 467 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 FSCN1Q16658 493 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 KRT71Q3SY84 523 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 H2AFVQ71UI9 128 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 PIGWQ7Z7B1 504 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 MCPH1Q8NEM0 835 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 ASAP3Q8TDY4 903 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 HVCN1Q96D96 273 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 PGM2Q96G03 612 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 CCDC134Q9H6E4 229 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms