RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 DUX4L5P0CJ88 424 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 DUX4L6P0CJ89 424 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 DUX4L7P0CJ90 424 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 MX2P20592 715 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 KRT6CP48668 564 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 GEMIN4P57678 1058 aaKnown RBP6.93□□□□□ -1.3
TRIM38-201ENST00000357085 DEFA1P59665 94 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 DEFA3P59666 94 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 TIMM10P62072 90 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 EPS8Q12929 822 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 SPATS1Q496A3 300 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 SCUBE1Q8IWY4 988 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 EMILIN3Q9NT22 766 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 NSMCE4AQ9NXX6 385 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 DUX4Q9UBX2 424 aa6.93□□□□□ -1.3
TRIM38-201ENST00000357085 MGEA5O60502 916 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 IL2RBP14784 551 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 TPD52P55327 224 aaPredicted RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 ARCQ7LC44 396 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 PNPT1Q8TCS8 783 aaKnown RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 TUBGCP5Q96RT8 1024 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 TMOD4Q9NZQ9 345 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 PADI4Q9UM07 663 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 KANSL1LA0AUZ9 987 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 TRAFD1O14545 582 aaPredicted RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 ECE1P42892 770 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 PTK2Q05397 1052 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 BNIP1Q12981 228 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 KLHDC7AQ5VTJ3 777 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 DCUN1D2Q6PH85 259 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 RHOT1Q8IXI2 618 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 WDR11Q9BZH6 1224 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 KLC2Q9H0B6 622 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 LMCD1Q9NZU5 365 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 DCCP43146 1447 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 SAC3D1A6NKF1 404 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 PDCD4Q53EL6 469 aaKnown RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 RWDD4Q6NW29 188 aaKnown RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 PIGWQ7Z7B1 504 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 PARVGQ9HBI0 331 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 ANKHQ9HCJ1 492 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 UBAP1Q9NZ09 502 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 DCTN4Q9UJW0 460 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 REXO2Q9Y3B8 237 aaKnown RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 GOLGA8MH3BSY2 632 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 MAGEC1O60732 1142 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 FAM69CQ0P6D2 419 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 CNPY1Q3B7I2 92 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 TAF1BQ53T94 588 aaPredicted RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 RIOK1Q9BRS2 568 aaKnown RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 ZCWPW1Q9H0M4 648 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 ARHGEF3Q9NR81 526 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 LRRC42Q9Y546 428 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 MAPK4P31152 587 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 VPS41P49754 854 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 MARSP56192 900 aaKnown RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 MKRN4PQ13434 485 aaPredicted RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 DPYSQ14117 519 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 INPP5AQ14642 412 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 NTRK3Q16288 839 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 C1orf228Q6PIY5 440 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 TOM1L2Q6ZVM7 507 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 CCDC125Q86Z20 511 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 TRIM59Q8IWR1 403 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 OXER1Q8TDS5 423 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 RBM15Q96T37 977 aaKnown RBP eCLIP6.92□□□□□ -1.34e-6■■■□□ 14.8
TRIM38-201ENST00000357085 ARMT1Q9H993 441 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 NPHS2Q9NP85 383 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 PPARGC1AQ9UBK2 798 aaKnown RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 TACC3Q9Y6A5 838 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 ADAMTS13Q76LX8 1427 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 ZNF701M0R085 212 aaPredicted RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 FAM58BPP0C7Q3 252 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 KNOP1Q1ED39 458 aaKnown RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 CYP4F22Q6NT55 531 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 DHDDSQ86SQ9 333 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 ZBTB8BQ8NAP8 495 aaPredicted RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 C1orf50Q9BV19 199 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 NUP85Q9BW27 656 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 MUC13Q9H3R2 512 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 MANSC1Q9H8J5 431 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 RABGEF1Q9UJ41 708 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 KPNA4O00629 521 aaPredicted RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 IGKV5-2P06315 115 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 EEF1DP29692 281 aaKnown RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 P3H1Q32P28 736 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 CCDC153Q494R4 210 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 ZCRB1Q8TBF4 217 aaKnown RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 NAT14Q8WUY8 206 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 VPS33BQ9H267 617 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 VPS11Q9H270 941 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 TNRC6CQ9HCJ0 1690 aaKnown RBP6.92□□□□□ -1.3
TRIM38-201ENST00000357085 ARHGEF35A5YM69 484 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 SRGAP2BP0DMP2 458 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 NAA20P61599 178 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 PRMT9Q6P2P2 845 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 PI16Q6UXB8 463 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 FKBP9P1Q75LS8 142 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 FAM178BQ8IXR5 827 aa6.92□□□□□ -1.3
TRIM38-201ENST00000357085 RCOR2Q8IZ40 523 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms