RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 TMEM8AQ9HCN3 771 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 KCNK9Q9NPC2 374 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 GTF3C4Q9UKN8 822 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 MAPTP10636 758 aaKnown RBP16.26■□□□□ 0.19
PTBP1-203ENST00000356948 TNNI1P19237 187 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 CLEC16AQ2KHT3 1053 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 TDRD10Q5VZ19 366 aaKnown RBP16.26■□□□□ 0.19
PTBP1-203ENST00000356948 YTHDF3Q7Z739 585 aaKnown RBP16.26■□□□□ 0.19
PTBP1-203ENST00000356948 HOOK3Q86VS8 718 aa16.26■□□□□ 0.19
PTBP1-203ENST00000356948 TCP11X1B4DZS4 312 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 STBD1O95210 358 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 UNGP13051 313 aaPredicted RBP16.25■□□□□ 0.19
PTBP1-203ENST00000356948 CYB5D1Q6P9G0 228 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 VSTM1Q6UX27 236 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 C4orf19Q8IY42 314 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 MCOLN2Q8IZK6 566 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 ZBTB10Q96DT7 871 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 PGM2Q96G03 612 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 KIF9Q9HAQ2 790 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 SAE1Q9UBE0 346 aaPredicted RBP16.25■□□□□ 0.19
PTBP1-203ENST00000356948 DIS3Q9Y2L1 958 aaKnown RBP16.25■□□□□ 0.19
PTBP1-203ENST00000356948 ATP8B3O60423 1300 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 TMEM120BA0PK00 339 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 PLSCR1O15162 318 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 GZMAP12544 262 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 DPEP1P16444 411 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 GPC3P51654 580 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 PRKG1Q13976 671 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 FASTKD3Q14CZ7 662 aaKnown RBP16.25■□□□□ 0.19
PTBP1-203ENST00000356948 CYP4F22Q6NT55 531 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 KIF2BQ8N4N8 673 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 SPOCK2Q92563 424 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 ARHGEF2Q92974 986 aaKnown RBP16.25■□□□□ 0.19
PTBP1-203ENST00000356948 CPSF2Q9P2I0 782 aaKnown RBP16.25■□□□□ 0.19
PTBP1-203ENST00000356948 ANKFY1Q9P2R3 1169 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 PNMA3Q9UL41 463 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 DRG2P55039 364 aaKnown RBP16.25■□□□□ 0.19
PTBP1-203ENST00000356948 DRP2Q13474 957 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 NBPF12Q5TAG4 269 aaPredicted RBP16.25■□□□□ 0.19
PTBP1-203ENST00000356948 FMNL3Q8IVF7 1028 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 OR5B17Q8NGF7 314 aa16.25■□□□□ 0.19
PTBP1-203ENST00000356948 FHDC1Q9C0D6 1143 aaPredicted RBP16.25■□□□□ 0.19
PTBP1-203ENST00000356948 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.25■□□□□ 0.192e-7■■□□□ 13.9
PTBP1-203ENST00000356948 WDR64B1ANS9 1081 aa16.24■□□□□ 0.19
PTBP1-203ENST00000356948 VNN1O95497 513 aa16.24■□□□□ 0.19
PTBP1-203ENST00000356948 RARGP13631 454 aa16.24■□□□□ 0.19
PTBP1-203ENST00000356948 ADCY8P40145 1251 aa16.24■□□□□ 0.19
PTBP1-203ENST00000356948 EIF3BP55884 814 aaKnown RBP16.24■□□□□ 0.19
PTBP1-203ENST00000356948 CYP1B1Q16678 543 aa16.24■□□□□ 0.19
PTBP1-203ENST00000356948 TMEM270Q6UE05 265 aa16.24■□□□□ 0.19
PTBP1-203ENST00000356948 C12orf56Q8IXR9 622 aa16.24■□□□□ 0.19
PTBP1-203ENST00000356948 TEPSINQ96N21 525 aa16.24■□□□□ 0.19
PTBP1-203ENST00000356948 MTRF1LQ9UGC7 380 aaKnown RBP16.24■□□□□ 0.19
PTBP1-203ENST00000356948 TPX2Q9ULW0 747 aaKnown RBP16.24■□□□□ 0.19
PTBP1-203ENST00000356948 KCNA3P22001 575 aa16.24■□□□□ 0.19
PTBP1-203ENST00000356948 GAD2Q05329 585 aa16.24■□□□□ 0.19
PTBP1-203ENST00000356948 TBC1D1Q86TI0 1168 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-203ENST00000356948 DDX27Q96GQ7 796 aaKnown RBP16.24■□□□□ 0.19
PTBP1-203ENST00000356948 R3HDMLQ9H3Y0 253 aa16.24■□□□□ 0.19
PTBP1-203ENST00000356948 A8MUI8 341 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 PODXLO00592 558 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 NR3C2P08235 984 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 NRLP54845 237 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 CDR2LQ86X02 465 aaPredicted RBP16.23■□□□□ 0.19
PTBP1-203ENST00000356948 MIEF2Q96C03 454 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 RNF146Q9NTX7 359 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 PASKQ96RG2 1323 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 MUTP22033 750 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 CALCOCO2Q13137 446 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 MFSD14AQ96MC6 490 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 MOV10L1Q9BXT6 1211 aaKnown RBP16.23■□□□□ 0.19
PTBP1-203ENST00000356948 YIPF3Q9GZM5 350 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 MTUS1Q9ULD2 1270 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 COQ4Q9Y3A0 265 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 FSCN2O14926 492 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 UPP2O95045 317 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 FDX1P10109 184 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 ATP4AP20648 1035 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 SMTNP53814 917 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 KCNJ2P63252 427 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 ZNF568Q3ZCX4 644 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 TMEM63BQ5T3F8 832 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 FAM167BQ9BTA0 163 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 POLR3FQ9H1D9 316 aaPredicted RBP16.23■□□□□ 0.19
PTBP1-203ENST00000356948 LRRC19Q9H756 370 aa16.23■□□□□ 0.19
PTBP1-203ENST00000356948 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.23■□□□□ 0.19
PTBP1-203ENST00000356948 CCT8L1PA6NM43 557 aa16.22■□□□□ 0.19
PTBP1-203ENST00000356948 SPAG7O75391 227 aa16.22■□□□□ 0.19
PTBP1-203ENST00000356948 MTA2O94776 668 aa16.22■□□□□ 0.19
PTBP1-203ENST00000356948 HLA-DRAP01903 254 aa16.22■□□□□ 0.19
PTBP1-203ENST00000356948 RFX1P22670 979 aa16.22■□□□□ 0.19
PTBP1-203ENST00000356948 MYBPC2Q14324 1141 aa16.22■□□□□ 0.19
PTBP1-203ENST00000356948 ZFYVE27Q5T4F4 411 aa16.22■□□□□ 0.19
PTBP1-203ENST00000356948 SYCP2LQ5T4T6 812 aa16.22■□□□□ 0.19
PTBP1-203ENST00000356948 TRIM68Q6AZZ1 485 aa16.22■□□□□ 0.19
PTBP1-203ENST00000356948 RHBDF2Q6PJF5 856 aa16.22■□□□□ 0.19
PTBP1-203ENST00000356948 CRELD2Q6UXH1 353 aaPredicted RBP16.22■□□□□ 0.19
PTBP1-203ENST00000356948 SRRM1Q8IYB3 904 aaKnown RBP16.22■□□□□ 0.19
PTBP1-203ENST00000356948 CCDC197Q8NCU1 140 aa16.22■□□□□ 0.19
PTBP1-203ENST00000356948 TARS2Q9BW92 718 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms