RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 PCDHB2Q9Y5E7 798 aa27.56■■■□□ 2
CLK2-201ENST00000355560 TSPAN1O60635 241 aa27.55■■■□□ 2
CLK2-201ENST00000355560 RPS6KA1Q15418 735 aa27.55■■■□□ 2
CLK2-201ENST00000355560 PEX26Q7Z412 305 aa27.55■■■□□ 2
CLK2-201ENST00000355560 MSANTD4Q8NCY6 345 aa27.55■■■□□ 2
CLK2-201ENST00000355560 GPBP1L1Q9HC44 474 aaPredicted RBP27.55■■■□□ 2
CLK2-201ENST00000355560 SMARCAL1Q9NZC9 954 aa27.55■■■□□ 2
CLK2-201ENST00000355560 IL18RAPO95256 599 aa27.55■■■□□ 2
CLK2-201ENST00000355560 STAG3L1P0CL83 205 aa27.55■■■□□ 2
CLK2-201ENST00000355560 MYL6P60660 151 aa27.55■■■□□ 2
CLK2-201ENST00000355560 BEX3Q00994 111 aa27.55■■■□□ 2
CLK2-201ENST00000355560 C2orf54Q08AI8 447 aa27.55■■■□□ 2
CLK2-201ENST00000355560 TMEM62Q0P6H9 643 aa27.55■■■□□ 2
CLK2-201ENST00000355560 ZNF572Q7Z3I7 529 aaPredicted RBP27.55■■■□□ 2
CLK2-201ENST00000355560 RHOT2Q8IXI1 618 aa27.55■■■□□ 2
CLK2-201ENST00000355560 ANKRD36BP1Q96IX9 119 aa27.55■■■□□ 2
CLK2-201ENST00000355560 GINS2Q9Y248 185 aa27.55■■■□□ 2
CLK2-201ENST00000355560 PCDHB4Q9Y5E5 795 aa27.55■■■□□ 2
CLK2-201ENST00000355560 BUB1BO60566 1050 aaPredicted RBP27.54■■■□□ 2
CLK2-201ENST00000355560 KIF4AO95239 1232 aa27.54■■■□□ 2
CLK2-201ENST00000355560 TNNC2P02585 160 aa27.54■■■□□ 2
CLK2-201ENST00000355560 PAFAH1B1P43034 410 aa27.54■■■□□ 2
CLK2-201ENST00000355560 BPIFB4P59827 614 aa27.54■■■□□ 2
CLK2-201ENST00000355560 TRPC3Q13507 836 aa27.54■■■□□ 2
CLK2-201ENST00000355560 TMEM270Q6UE05 265 aa27.54■■■□□ 2
CLK2-201ENST00000355560 RNF216Q9NWF9 866 aaPredicted RBP27.54■■■□□ 2
CLK2-201ENST00000355560 COG5Q9UP83 839 aa27.54■■■□□ 2
CLK2-201ENST00000355560 Q9Y3F1 56 aa27.54■■■□□ 2
CLK2-201ENST00000355560 CENPFP49454 3210 aa27.54■■■□□ 2
CLK2-201ENST00000355560 MYL3P08590 195 aa27.53■■■□□ 2
CLK2-201ENST00000355560 GPC5P78333 572 aa27.53■■■□□ 2
CLK2-201ENST00000355560 TAF4BQ92750 862 aa27.53■■■□□ 2
CLK2-201ENST00000355560 MS4A14Q96JA4 679 aa27.53■■■□□ 2
CLK2-201ENST00000355560 PNKPQ96T60 521 aa27.53■■■□□ 2
CLK2-201ENST00000355560 MBLAC1A4D2B0 266 aaPredicted RBP27.53■■■□□ 2
CLK2-201ENST00000355560 PSEN2P49810 448 aa27.53■■■□□ 2
CLK2-201ENST00000355560 CTTNBP2NLQ9P2B4 639 aa27.53■■■□□ 2
CLK2-201ENST00000355560 TMEM88BA6NKF7 163 aa27.52■■■□□ 2
CLK2-201ENST00000355560 FGFR4P22455 802 aa27.52■■■□□ 2
CLK2-201ENST00000355560 SGSM1Q2NKQ1 1148 aa27.52■■■□□ 2
CLK2-201ENST00000355560 CFAP221Q4G0U5 840 aa27.52■■■□□ 2
CLK2-201ENST00000355560 NT5DC3Q86UY8 548 aa27.52■■■□□ 2
CLK2-201ENST00000355560 ZNF677Q86XU0 584 aa27.52■■■□□ 2
CLK2-201ENST00000355560 SMC1BQ8NDV3 1235 aa27.52■■■□□ 2
CLK2-201ENST00000355560 SPATA4Q8NEY3 305 aa27.52■■■□□ 2
CLK2-201ENST00000355560 ARHGAP39Q9C0H5 1083 aa27.52■■■□□ 2
CLK2-201ENST00000355560 ADAMTS10Q9H324 1103 aa27.52■■■□□ 2
CLK2-201ENST00000355560 RNF14Q9UBS8 474 aa27.52■■■□□ 2
CLK2-201ENST00000355560 KCNK3O14649 394 aa27.52■■■□□ 2
CLK2-201ENST00000355560 TBC1D8O95759 1140 aa27.52■■■□□ 2
CLK2-201ENST00000355560 NFICP08651 508 aa27.52■■■□□ 2
CLK2-201ENST00000355560 CYP2C9P11712 490 aa27.52■■■□□ 2
CLK2-201ENST00000355560 AKR1A1P14550 325 aa27.52■■■□□ 2
CLK2-201ENST00000355560 ITIH3Q06033 890 aa27.52■■■□□ 2
CLK2-201ENST00000355560 RBBP8NLQ8NC74 664 aaPredicted RBP27.52■■■□□ 2
CLK2-201ENST00000355560 A0A1B0GUA9 196 aa27.51■■□□□ 1.99
CLK2-201ENST00000355560 SMIM35A0A1B0GVV1 85 aa27.51■■□□□ 1.99
CLK2-201ENST00000355560 HAS3O00219 553 aa27.51■■□□□ 1.99
CLK2-201ENST00000355560 ATMINO43313 823 aaPredicted RBP27.51■■□□□ 1.99
CLK2-201ENST00000355560 FCGRTP55899 365 aa27.51■■□□□ 1.99
CLK2-201ENST00000355560 HIC1Q14526 733 aa27.51■■□□□ 1.99
CLK2-201ENST00000355560 CLEC16AQ2KHT3 1053 aa27.51■■□□□ 1.99
CLK2-201ENST00000355560 HHIPL1Q96JK4 782 aa27.51■■□□□ 1.99
CLK2-201ENST00000355560 ADPGKQ9BRR6 497 aa27.51■■□□□ 1.99
CLK2-201ENST00000355560 NIF3L1Q9GZT8 377 aa27.51■■□□□ 1.99
CLK2-201ENST00000355560 CNTN6Q9UQ52 1028 aa27.51■■□□□ 1.99
CLK2-201ENST00000355560 STXBP5LQ9Y2K9 1186 aa27.51■■□□□ 1.99
CLK2-201ENST00000355560 LACTBL1A8MY62 500 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 MEFVO15553 781 aaPredicted RBP27.5■■□□□ 1.99
CLK2-201ENST00000355560 PSMC4P43686 418 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 HADHBP55084 474 aaKnown RBP27.5■■□□□ 1.99
CLK2-201ENST00000355560 FSCN1Q16658 493 aaKnown RBP27.5■■□□□ 1.99
CLK2-201ENST00000355560 ZNF699Q32M78 642 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 CYP4F22Q6NT55 531 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 RUFY4Q6ZNE9 571 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 PDCL3Q9H2J4 239 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 ZNF446Q9NWS9 450 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 GPR32O75388 356 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 GNA15P30679 374 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 ACAD10Q6JQN1 1059 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 TMCO3Q6UWJ1 677 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 ZNF653Q96CK0 615 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 GCOM2Q9BZD3 368 aaPredicted RBP27.5■■□□□ 1.99
CLK2-201ENST00000355560 ABCB6Q9NP58 842 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 CHORDC1Q9UHD1 332 aaPredicted RBP27.5■■□□□ 1.99
CLK2-201ENST00000355560 RAB21Q9UL25 225 aa27.5■■□□□ 1.99
CLK2-201ENST00000355560 CDC42EP1Q00587 391 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 TCEAL1Q15170 157 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 KYAT1Q16773 422 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 JADE1Q6IE81 842 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 OSMRQ99650 979 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 KATNAL1Q9BW62 490 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 XYLT2Q9H1B5 865 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 AMFRQ9UKV5 643 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 CES2O00748 559 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 KIF3CO14782 793 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 KRT19P08727 400 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 UNGP13051 313 aaPredicted RBP27.49■■□□□ 1.99
CLK2-201ENST00000355560 ADAM17P78536 824 aa27.49■■□□□ 1.99
CLK2-201ENST00000355560 POU5F1Q01860 360 aaKnown RBP27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms