RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 A0A087X0T9 212 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 RSPH10B2B2RC85 870 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 FAM228BP0C875 321 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 RSPH10BP0C881 870 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 RAB27AP51159 221 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 KPNA1P52294 538 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-202ENST00000346436 EPHB3P54753 998 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 ARHGEF7Q14155 803 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 IKBKEQ14164 716 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 NUGGCQ68CJ6 796 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 FRA10AC1Q70Z53 315 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 DEFB128Q7Z7B8 93 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 FAM83AQ86UY5 434 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 ARHGAP24Q8N264 748 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 LXNQ9BS40 222 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 ADAM33Q9BZ11 813 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 RNF225M0QZC1 329 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-202ENST00000346436 ZRANB2O95218 330 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLCN6-202ENST00000346436 ESRRBO95718 433 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 RPL10AP62906 217 aaKnown RBP11.5□□□□□ -0.57
CLCN6-202ENST00000346436 ICE2Q659A1 982 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 CCDC62Q6P9F0 684 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 MMS22LQ6ZRQ5 1243 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 ERGIC2Q96RQ1 377 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 SCAF8Q9UPN6 1271 aaKnown RBP11.5□□□□□ -0.57
CLCN6-202ENST00000346436 GMNCA6NCL1 334 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 CCDC160A6NGH7 325 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 EIF3HO15372 352 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLCN6-202ENST00000346436 EFCAB14O75071 495 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 ZBED1O96006 694 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 STX1BP61266 288 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 YWHAGP61981 247 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLCN6-202ENST00000346436 PPP2R2AP63151 447 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 IL17AQ16552 155 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 ACBD5Q5T8D3 534 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-202ENST00000346436 TDRD10Q5VZ19 366 aaKnown RBP11.5□□□□□ -0.57
CLCN6-202ENST00000346436 JADE1Q6IE81 842 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 SLC30A10Q6XR72 485 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 SUN1O94901 812 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 MOCS2O96007 188 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-202ENST00000346436 HARS2P49590 506 aaKnown RBP11.5□□□□□ -0.57
CLCN6-202ENST00000346436 CTCFP49711 727 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-202ENST00000346436 PMS2P54278 862 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 GALCP54803 685 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 ZNF394Q53GI3 561 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 SH2D4BQ5SQS7 431 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 MCUQ8NE86 351 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 C1orf54Q8WWF1 131 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 ATG4CQ96DT6 458 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 ANAPC7Q9UJX3 599 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 PLAGL2Q9UPG8 496 aa11.5□□□□□ -0.57
CLCN6-202ENST00000346436 CAND2O75155 1236 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 IL18RAPO95256 599 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 ODC1P11926 461 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 CAP2P40123 477 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 ITPRIPL1Q6GPH6 555 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 FAM47EQ6ZV65 393 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 KIAA0895Q8NCT3 520 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 ALKBH8Q96BT7 664 aaKnown RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 RNPC3Q96LT9 517 aaKnown RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 TUFT1Q9NNX1 390 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 GRID2IPA4D2P6 1211 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 SERPINB6P35237 376 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 CREMQ03060 361 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 SLC45A4Q5BKX6 768 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 TRIM48Q8IWZ4 208 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 SLC35G2Q8TBE7 412 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 GPRASP2Q96D09 838 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 DRC3Q9H069 523 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 VCXQ9H320 206 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 PHF20L1A8MW92 1017 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 NVLO15381 856 aaKnown RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 ATMINO43313 823 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 PSMA2P25787 234 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 HSD17B4P51659 736 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 ZKSCAN4Q969J2 545 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 KLHL29Q96CT2 875 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 FAM213AQ9BRX8 229 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 EMSYQ7Z589 1322 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 UBE4BO95155 1302 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 ADORA2BP29275 332 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 LMBRD2Q68DH5 695 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 ENOSF1Q7L5Y1 443 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 CNOT8Q9UFF9 292 aaKnown RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 M0QYV0 167 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 GPD1LQ8N335 351 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 SCG3Q8WXD2 468 aaKnown RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 MYCBPQ99417 103 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 EPAS1Q99814 870 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 DUSP9Q99956 384 aaKnown RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 NUP85Q9BW27 656 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 NUF2Q9BZD4 464 aa11.49□□□□□ -0.57
CLCN6-202ENST00000346436 AGO2Q9UKV8 859 aaKnown RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 TTC7AQ9ULT0 858 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 PRG3Q9Y2Y8 225 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-202ENST00000346436 A0A1W2PQJ5 194 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 SSU72P8A0A1W2PR75 194 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 TTLL13PA6NNM8 815 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 PPP1R37O75864 691 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms