RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 SURF1Q15526 300 aa22.55■■□□□ 1.2
SMARCB1-202ENST00000344921 PLPP4Q5VZY2 271 aa22.55■■□□□ 1.2
SMARCB1-202ENST00000344921 FUT10Q6P4F1 479 aa22.55■■□□□ 1.2
SMARCB1-202ENST00000344921 NT5DC4Q86YG4 428 aa22.55■■□□□ 1.2
SMARCB1-202ENST00000344921 CACTINQ8WUQ7 758 aaKnown RBP22.55■■□□□ 1.2
SMARCB1-202ENST00000344921 FNBP1Q96RU3 617 aa22.55■■□□□ 1.2
SMARCB1-202ENST00000344921 DMAC2Q9NW81 257 aa22.55■■□□□ 1.2
SMARCB1-202ENST00000344921 NUB1Q9Y5A7 615 aa22.55■■□□□ 1.2
SMARCB1-202ENST00000344921 DLATP10515 647 aaKnown RBP22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 MYBPC2Q14324 1141 aa22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 TIGD5Q53EQ6 642 aa22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 SPATA1Q5VX52 437 aa22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 EFCAB13Q8IY85 973 aa22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 CCDC127Q96BQ5 260 aa22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 DHTKD1Q96HY7 919 aaPredicted RBP22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 SF3B1O75533 1304 aaKnown RBP eCLIP22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 PRRC2BQ5JSZ5 2229 aaKnown RBP22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 CD44P16070 742 aaKnown RBP22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 CENPPQ6IPU0 288 aa22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 PDE12Q6L8Q7 609 aaKnown RBP22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 KIAA1841Q6NSI8 718 aa22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 TMEM130Q8N3G9 435 aa22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 NSUN3Q9H649 340 aaKnown RBP22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 NGRNQ9NPE2 291 aaKnown RBP22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 DPP3Q9NY33 737 aa22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 PCDHGC5Q9Y5F6 944 aa22.54■■□□□ 1.2
SMARCB1-202ENST00000344921 SOD2P04179 222 aa22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 TMEM191BP0C7N4 346 aa22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 TNNI1P19237 187 aa22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 CASP4P49662 377 aa22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 CYP24A1Q07973 514 aa22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 EDRF1Q3B7T1 1238 aa22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 ZCWPW2Q504Y3 356 aa22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 LMBRD2Q68DH5 695 aaPredicted RBP22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 C3orf58Q8NDZ4 430 aa22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 TMEM174Q8WUU8 243 aa22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 PPP2R3CQ969Q6 453 aa22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 VN1R3Q9BXE9 311 aa22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 GPR62Q9BZJ7 368 aa22.53■■□□□ 1.2
SMARCB1-202ENST00000344921 TRIM49BA6NDI0 452 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 PPP1R3GB7ZBB8 358 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 TRAPPC3O43617 180 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 CXCL14O95715 111 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 CCNE1P24864 410 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 LRPAP1P30533 357 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 ELAVL2Q12926 359 aaKnown RBP22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 SMC1AQ14683 1233 aaKnown RBP22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 NFIL3Q16649 462 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 ANKRD40Q6AI12 368 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 TAS1R1Q7RTX1 841 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 CEP57Q86XR8 500 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 MAFAQ8NHW3 353 aaPredicted RBP22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 AUTS2Q8WXX7 1259 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 EEF2KMTQ96G04 330 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 ANKRD36BP1Q96IX9 119 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 ZBP1Q9H171 429 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 CTNND2Q9UQB3 1225 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 EYSQ5T1H1 3165 aa22.52■■□□□ 1.2
SMARCB1-202ENST00000344921 TMEM189-UBE2V1I3L0A0 370 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 C2CD2LO14523 706 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 CETN3O15182 167 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 URODP06132 367 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 IGFBP6P24592 240 aaPredicted RBP22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 LRRC63Q05C16 580 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 PSMD6Q15008 389 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 SKIV2LQ15477 1246 aaKnown RBP22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 USP41Q3LFD5 358 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 FAM171A1Q5VUB5 890 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 NELFBQ8WX92 580 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 MFSD14AQ96MC6 490 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 R3HCC1Q9Y3T6 440 aaKnown RBP22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 CTSAP10619 480 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 BRCC3P46736 316 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 PMS1P54277 932 aaKnown RBP22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 TCEAL5Q5H9L2 206 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 RBM23Q86U06 439 aaKnown RBP22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 B3GALT6Q96L58 329 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 POP1Q99575 1024 aaKnown RBP22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 HERC2P3Q9BVR0 1158 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 MTMR12Q9C0I1 747 aa22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 MRPL17Q9NRX2 175 aaKnown RBP22.51■■□□□ 1.19
SMARCB1-202ENST00000344921 MYO7AQ13402 2215 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 BICDL2A1A5D9 508 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 I3L4J1 428 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 FSCN2O14926 492 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 TNNC2P02585 160 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 PTMSP20962 102 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 PSMC2P35998 433 aaKnown RBP22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 GLUD2P49448 558 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 FKBP3Q00688 224 aaKnown RBP22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 PAK1Q13153 545 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 DUOXA2Q1HG44 320 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 CCDC183Q5T5S1 534 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 C9orf57Q5W0N0 161 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 WDR49Q8IV35 697 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 IGFLR1Q9H665 355 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 INTS13Q9NVM9 706 aa22.5■■□□□ 1.19
SMARCB1-202ENST00000344921 HIDE1A8MVS5 230 aa22.49■■□□□ 1.19
SMARCB1-202ENST00000344921 AKAP3O75969 853 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms