RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 FNIP2Q9P278 1114 aa14.2□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PRUNE2Q8WUY3 3088 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PLXNA4Q9HCM2 1894 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 GADD45BO75293 160 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 TMEM132DQ14C87 1099 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SURF1Q15526 300 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 NFIL3Q16649 462 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PUS10Q3MIT2 529 aaKnown RBP14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 LEXMQ3ZCV2 418 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 JADE1Q6IE81 842 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 BEST2Q8NFU1 509 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PIK3R5Q8WYR1 880 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 C18orf25Q96B23 403 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ANP32EQ9BTT0 268 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 TTPALQ9BTX7 342 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 KCTD10Q9H3F6 313 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 GOLGA2P5Q9HBQ8 144 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 RBAKQ9NYW8 714 aaPredicted RBP14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 TRAF3IP3Q9Y228 551 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PCDHGC5Q9Y5F6 944 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 XIRP2A4UGR9 3374 aa14.19□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ZNF233A6NK53 670 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SYN3O14994 580 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 FGFR3P22607 806 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 LTBRP36941 435 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 AARSP49588 968 aaKnown RBP eCLIP14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PNOCQ13519 176 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 TPRNQ4KMQ1 711 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 KIAA1841Q6NSI8 718 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 TAS1R1Q7RTX1 841 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 RBM23Q86U06 439 aaKnown RBP14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 NELFCDQ8IXH7 590 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 XXYLT1Q8NBI6 393 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 C3orf58Q8NDZ4 430 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SAAL1Q96ER3 474 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ASB2Q96Q27 587 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PRDM6Q9NQX0 595 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CLDND1Q9NY35 253 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CACNG4Q9UBN1 327 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 TUBGCP4Q9UGJ1 667 aa14.18□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ANO9A1A5B4 782 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CLASP2O75122 1294 aaKnown RBP14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 HOXB8P17481 243 aaPredicted RBP14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 GTF2F1P35269 517 aaKnown RBP eCLIP14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 FAM171A1Q5VUB5 890 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CACTINQ8WUQ7 758 aaKnown RBP14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 RABGGTAQ92696 567 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 MSLNLQ96KJ4 702 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SUSD3Q96L08 255 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 KLHL5Q96PQ7 755 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PCIF1Q9H4Z3 704 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 DMAC2Q9NW81 257 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PCDHA5Q9Y5H7 936 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 TDRD15B5MCY1 1934 aaKnown RBP14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PIRO00625 290 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PER2O15055 1255 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CSPG5O95196 566 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 GLP2RO95838 553 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ADH1AP07327 375 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 NFICP08651 508 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CNPP09543 421 aaKnown RBP14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 KCNA5P22460 613 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SNRNP35Q16560 246 aaKnown RBP14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 RTP2Q5QGT7 225 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ZNF658Q5TYW1 1059 aaPredicted RBP14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 HDAC7Q8WUI4 952 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 AUTS2Q8WXX7 1259 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CASP10Q92851 521 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SMARCE1Q969G3 411 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 FAM212AQ96EL1 285 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 GBP4Q96PP9 640 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 IGFLR1Q9H665 355 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CLEC1BQ9P126 229 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 DPP7Q9UHL4 492 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 NUB1Q9Y5A7 615 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 HCFC2Q9Y5Z7 792 aa14.17□□□□□ -0.14
HLA-DQA1-201ENST00000343139 REV3LO60673 3130 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ARHGEF37A1IGU5 675 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 M0QZQ0 153 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 MAPK13O15264 365 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 TEX28O15482 410 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 LINC01565O15544 149 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 TBX10O75333 385 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PRPF40AO75400 957 aaKnown RBP14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 PPP1R2P41236 205 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 NDUFV1P49821 464 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CLCN4P51793 760 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SPAG1Q07617 926 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 TJAP1Q5JTD0 557 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 C9orf57Q5W0N0 161 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ANKS3Q6ZW76 656 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 CBWD2Q8IUF1 395 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 EFCAB13Q8IY85 973 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 ZSWIM2Q8NEG5 633 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 VN1R2Q8NFZ6 395 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 LNX1Q8TBB1 728 aaPredicted RBP14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 HASPINQ8TF76 798 aa14.16□□□□□ -0.14
HLA-DQA1-201ENST00000343139 SLC22A17Q8WUG5 538 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms