RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 C18orf25Q96B23 403 aaPredicted RBP19.32■□□□□ 0.68
SDCBP2-201ENST00000339987 TBC1D13Q9NVG8 400 aa19.32■□□□□ 0.68
SDCBP2-201ENST00000339987 DPP3Q9NY33 737 aa19.32■□□□□ 0.68
SDCBP2-201ENST00000339987 TUBGCP4Q9UGJ1 667 aa19.32■□□□□ 0.68
SDCBP2-201ENST00000339987 ITGA11Q9UKX5 1188 aa19.32■□□□□ 0.68
SDCBP2-201ENST00000339987 COQ4Q9Y3A0 265 aa19.32■□□□□ 0.68
SDCBP2-201ENST00000339987 TBKBP1A7MCY6 615 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 CBFA2T2O43439 604 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 GJB5O95377 273 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 POMCP01189 267 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 LRPAP1P30533 357 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 BIRC3Q13489 604 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 C9orf50Q5SZB4 431 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 FKBP15Q5T1M5 1219 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 HERC6Q8IVU3 1022 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 CMTR2Q8IYT2 770 aaKnown RBP19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 C1orf127Q8N9H9 656 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 FAM84AQ96KN4 292 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 NAP1L5Q96NT1 182 aaPredicted RBP19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 UBE2OQ9C0C9 1292 aaKnown RBP19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 MMRN2Q9H8L6 949 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 GRPEL1Q9HAV7 217 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 IFNKQ9P0W0 207 aa19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 TDRD15B5MCY1 1934 aaKnown RBP19.31■□□□□ 0.68
SDCBP2-201ENST00000339987 PES1O00541 588 aaKnown RBP19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 AP5Z1O43299 807 aa19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 ATP2A2P16615 1042 aaKnown RBP19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 BMP8BP34820 402 aa19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 HTRA4P83105 476 aaPredicted RBP19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 SOX4Q06945 474 aaPredicted RBP19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 DSC1Q08554 894 aa19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 CETN1Q12798 172 aa19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 TUSC3Q13454 348 aa19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 NR1I3Q14994 352 aa19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 SHHQ15465 462 aa19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 LRRC43Q8N309 656 aa19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 CXorf38Q8TB03 319 aa19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 RNPC3Q96LT9 517 aaKnown RBP19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 SIX4Q9UIU6 781 aa19.3■□□□□ 0.68
SDCBP2-201ENST00000339987 ANO9A1A5B4 782 aa19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 PHACTR2O75167 634 aa19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 VNN1O95497 513 aa19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 TPM3P06753 285 aa19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 RPL9P32969 192 aaKnown RBP19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 GUCY2FP51841 1108 aa19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 RNASELQ05823 741 aaKnown RBP19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 EPC2Q52LR7 807 aa19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 GBP6Q6ZN66 633 aa19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 TMCO2Q7Z6W1 182 aaPredicted RBP19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 FBXL13Q8NEE6 735 aa19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 UROC1Q96N76 676 aa19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 ERGIC2Q96RQ1 377 aa19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 XPO4Q9C0E2 1151 aaKnown RBP19.29■□□□□ 0.68
SDCBP2-201ENST00000339987 DDHD2O94830 711 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 HLA-DRAP01903 254 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 ITGB3P05106 788 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 PIK3CAP42336 1068 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 RBP5P82980 135 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 PLCB2Q00722 1185 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 UBXN1Q04323 297 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 NCOA4Q13772 614 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 C9orf57Q5W0N0 161 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 FAM117BQ6P1L5 589 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 COLGALT2Q8IYK4 626 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 TAS1R2Q8TE23 839 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 DDX27Q96GQ7 796 aaKnown RBP19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 FAM193BQ96PV7 902 aaPredicted RBP19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 YME1L1Q96TA2 773 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 RAB20Q9NX57 234 aa19.28■□□□□ 0.68
SDCBP2-201ENST00000339987 TEX33O43247 280 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 POLR2BP30876 1174 aaKnown RBP19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 MRE11P49959 708 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 TRPC3Q13507 836 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 EXOC3L4Q17RC7 722 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 PAN2Q504Q3 1202 aaKnown RBP19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 ZNF280BQ86YH2 543 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 LRRC52Q8N7C0 313 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 RAD9AQ99638 391 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 TMEM175Q9BSA9 504 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 ZBED2Q9BTP6 218 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 TRIM5Q9C035 493 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 NRDE2Q9H7Z3 1164 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 GOLGA2P5Q9HBQ8 144 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 AGAP1Q9UPQ3 857 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 INSL6Q9Y581 213 aa19.27■□□□□ 0.68
SDCBP2-201ENST00000339987 A0A1W2PQC6 194 aa19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 PIRO00625 290 aa19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 B4GALT3O60512 393 aa19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 STAU1O95793 577 aaKnown RBP19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 CST3P01034 146 aaPredicted RBP19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 ATICP31939 592 aa19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 BTG3Q14201 252 aaPredicted RBP19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 EHBP1Q8NDI1 1231 aa19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 LMO3Q8TAP4 145 aa19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 TAF4BQ92750 862 aa19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 SEMA4DQ92854 862 aa19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 GCNT4Q9P109 453 aa19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 R3HCC1Q9Y3T6 440 aaKnown RBP19.26■□□□□ 0.67
SDCBP2-201ENST00000339987 CASTOR2A6NHX0 329 aa19.25■□□□□ 0.67
SDCBP2-201ENST00000339987 PODXLO00592 558 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms