RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 DDX1Q92499 740 aaKnown RBP17.45■□□□□ 0.38
LITAF-201ENST00000339430 ATP6V0A1Q93050 837 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 HVCN1Q96D96 273 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 WNT8AQ9H1J5 351 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 JPH1Q9HDC5 661 aaPredicted RBP17.45■□□□□ 0.38
LITAF-201ENST00000339430 CNOT8Q9UFF9 292 aaKnown RBP17.45■□□□□ 0.38
LITAF-201ENST00000339430 RASAL2Q9UJF2 1139 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 MTA2O94776 668 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 ERLIN2O94905 339 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 CYP1A2P05177 515 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 CTNNA2P26232 953 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 CHRNA3P32297 505 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 RPL21P46778 160 aaKnown RBP17.45■□□□□ 0.38
LITAF-201ENST00000339430 KCNJ1P48048 391 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 MAGOHP61326 146 aaKnown RBP17.45■□□□□ 0.38
LITAF-201ENST00000339430 PRKCEQ02156 737 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 C2CD6Q53TS8 623 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 SPIRE2Q8WWL2 714 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 FBXL18Q96ME1 805 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 NTPCRQ9BSD7 190 aaKnown RBP17.45■□□□□ 0.38
LITAF-201ENST00000339430 TXLNGYQ9BZA5 131 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 POLR3FQ9H1D9 316 aaPredicted RBP17.45■□□□□ 0.38
LITAF-201ENST00000339430 GTF3C4Q9UKN8 822 aa17.45■□□□□ 0.38
LITAF-201ENST00000339430 PSAPP07602 524 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 MAPK4P31152 587 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 BIRC3Q13489 604 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 CLUL1Q15846 466 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 ZNF792Q3KQV3 632 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 UBAP2Q5T6F2 1119 aaKnown RBP17.44■□□□□ 0.38
LITAF-201ENST00000339430 PLEKHH3Q7Z736 793 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 NLRP14Q86W24 1093 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 ABRAQ8N0Z2 381 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 ARFGAP2Q8N6H7 521 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 RDM1Q8NG50 284 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 TMC2Q8TDI7 906 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 ZNF473Q8WTR7 871 aaKnown RBP17.44■□□□□ 0.38
LITAF-201ENST00000339430 ZNF516Q92618 1163 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 GRHL1Q9NZI5 618 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 SLC9A2Q9UBY0 812 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 NFASCO94856 1347 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 PMS2P54278 862 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 ACTR2P61160 394 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 ACAD10Q6JQN1 1059 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 LLGL2Q6P1M3 1020 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 SLC13A5Q86YT5 568 aaPredicted RBP17.44■□□□□ 0.38
LITAF-201ENST00000339430 CCDC105Q8IYK2 499 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 ZNF784Q8NCA9 323 aaPredicted RBP17.44■□□□□ 0.38
LITAF-201ENST00000339430 CCT8L2Q96SF2 557 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 SENP7Q9BQF6 1050 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 TRIM7Q9C029 511 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 EPB41L4BQ9H329 900 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 CYP26B1Q9NR63 512 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 PCDHA3Q9Y5H8 950 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 LRRC37A2A6NM11 1700 aa17.44■□□□□ 0.38
LITAF-201ENST00000339430 MCM3APO60318 1980 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 SMIM23A6NLE4 172 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 DGAT1O75907 488 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 RARAP10276 462 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 YY1P25490 414 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 LIG3P49916 1009 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 WNT7BP56706 349 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 PPP2R2AP63151 447 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 CRHR2Q13324 411 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 DPP9Q86TI2 863 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 FBXO16Q8IX29 292 aaPredicted RBP17.43■□□□□ 0.38
LITAF-201ENST00000339430 UHMK1Q8TAS1 419 aaKnown RBP17.43■□□□□ 0.38
LITAF-201ENST00000339430 MYCBPAPQ8TBZ2 947 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 ZFYVE28Q9HCC9 887 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 SLC12A6Q9UHW9 1150 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 CAND2O75155 1236 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 HSPA6P17066 643 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 UBA1P22314 1058 aaKnown RBP17.43■□□□□ 0.38
LITAF-201ENST00000339430 SSTR3P32745 418 aaPredicted RBP17.43■□□□□ 0.38
LITAF-201ENST00000339430 TM4SF4P48230 202 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 ACOT2P49753 483 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 GRB14Q14449 540 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 AGBL2Q5U5Z8 902 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 SPOPLQ6IQ16 392 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 C17orf99Q6UX52 265 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 EFCAB13Q8IY85 973 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 CPA5Q8WXQ8 436 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 TMEM143Q96AN5 459 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 IFT74Q96LB3 600 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 ATP6V0A4Q9HBG4 840 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.43■□□□□ 0.38
LITAF-201ENST00000339430 PCYOX1Q9UHG3 505 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 ANAPC7Q9UJX3 599 aa17.43■□□□□ 0.38
LITAF-201ENST00000339430 ASB14A6NK59 587 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 CLDN3O15551 220 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 TNNI1P19237 187 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 COILP38432 576 aaPredicted RBP17.42■□□□□ 0.38
LITAF-201ENST00000339430 LIG4P49917 911 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 CLEC16AQ2KHT3 1053 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 ARMCX2Q7L311 632 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 USP37Q86T82 979 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 MICALL1Q8N3F8 863 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 MCPH1Q8NEM0 835 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 MORC4Q8TE76 937 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 RNF25Q96BH1 459 aaPredicted RBP17.42■□□□□ 0.38
LITAF-201ENST00000339430 C17orf75Q9HAS0 396 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms