RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 MTMR12Q9C0I1 747 aa18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 ISCUQ9H1K1 167 aa18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 TNFSF13BQ9Y275 285 aa18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 NUB1Q9Y5A7 615 aa18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 TCP1P17987 556 aaKnown RBP18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 TMOD1P28289 359 aa18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 AARSP49588 968 aaKnown RBP eCLIP18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 INHBEP58166 350 aa18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 CAGE1Q8TC20 777 aa18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 CPB2Q96IY4 423 aa18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 MS4A14Q96JA4 679 aa18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 ZFYVE28Q9HCC9 887 aa18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 PRMT7Q9NVM4 692 aaPredicted RBP18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 FAN1Q9Y2M0 1017 aa18.4■□□□□ 0.54
ATAD3A-201ENST00000339113 ANKRD62A6NC57 917 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 PHACTR2O75167 634 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 NCOA4Q13772 614 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 ENOSF1Q7L5Y1 443 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 TLK2Q86UE8 772 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 IFNLR1Q8IU57 520 aaPredicted RBP18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 WDR49Q8IV35 697 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 TMEM130Q8N3G9 435 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 CTNNBL1Q8WYA6 563 aaPredicted RBP18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 RPGRIP1Q96KN7 1286 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 CHORDC1Q9UHD1 332 aaPredicted RBP18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 MEFVO15553 781 aaPredicted RBP18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 ACO1P21399 889 aaKnown RBP18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 GRM1Q13255 1194 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 HIC1Q14526 733 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 FAM187BQ17R55 369 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 EFCAB13Q8IY85 973 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 LMBR1Q8WVP7 490 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 NLRP7Q8WX94 980 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 COG5Q9UP83 839 aa18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 RRP15Q9Y3B9 282 aaKnown RBP18.39■□□□□ 0.53
ATAD3A-201ENST00000339113 NCANO14594 1321 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 TNPO2O14787 897 aaKnown RBP18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 IGHA2P01877 340 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 CDR2Q01850 454 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 CUL2Q13617 745 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 SLFN11Q7Z7L1 901 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 RFFLQ8WZ73 363 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 RNF216Q9NWF9 866 aaPredicted RBP18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 TARSL2A2RTX5 802 aaKnown RBP18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 CXCL8P10145 99 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 ARF4P18085 180 aaPredicted RBP18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 FGFR4P22455 802 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 RGS2P41220 211 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 PDE6CP51160 858 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 NOP14P78316 857 aaKnown RBP18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 CKAP4Q07065 602 aaKnown RBP18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 C2orf54Q08AI8 447 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 TMEM62Q0P6H9 643 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 PDZD7Q9H5P4 517 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 TSKSQ9UJT2 592 aa18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 ABT1Q9ULW3 272 aaKnown RBP18.38■□□□□ 0.53
ATAD3A-201ENST00000339113 BUB1BO60566 1050 aaPredicted RBP18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 RTN2O75298 545 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 F2P00734 622 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 CLTAP09496 248 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 MYL6P60660 151 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 TFAMQ00059 246 aaKnown RBP18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 BEX3Q00994 111 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 IFI16Q16666 785 aaKnown RBP18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 MAP9Q49MG5 647 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 LCMT1Q9UIC8 334 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 SMIM10L2AP0DMW4 78 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 SMIM10L2BP0DMW5 78 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 GZMAP12544 262 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 DUOXA2Q1HG44 320 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 KIZQ2M2Z5 673 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 DAAM2Q86T65 1068 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 ARHGAP39Q9C0H5 1083 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 FAM49AQ9H0Q0 323 aaPredicted RBP18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 CDHR5Q9HBB8 845 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 STXBP5LQ9Y2K9 1186 aa18.37■□□□□ 0.53
ATAD3A-201ENST00000339113 KIF4AO95239 1232 aa18.36■□□□□ 0.53
ATAD3A-201ENST00000339113 ASS1P00966 412 aaKnown RBP18.36■□□□□ 0.53
ATAD3A-201ENST00000339113 CCDC102AQ96A19 550 aa18.36■□□□□ 0.53
ATAD3A-201ENST00000339113 SCLT1Q96NL6 688 aa18.36■□□□□ 0.53
ATAD3A-201ENST00000339113 APBA2Q99767 749 aa18.36■□□□□ 0.53
ATAD3A-201ENST00000339113 ATMINO43313 823 aaPredicted RBP18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 ZEB2O60315 1214 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 CLSTN1O94985 981 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 STAG3L1P0CL83 205 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 TM4SF4P48230 202 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 AP3M2P53677 418 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 IRF5Q13568 498 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 RPS6KA1Q15418 735 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 ZNF572Q7Z3I7 529 aaPredicted RBP18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 NT5DC3Q86UY8 548 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 SPATA4Q8NEY3 305 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 FAM81BQ96LP2 452 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 GINS2Q9Y248 185 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 RRN3P2A6NIE6 340 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 B4GALT4O60513 344 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 TSPAN1O60635 241 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 CFHP08603 1231 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 SREBF2Q12772 1141 aa18.35■□□□□ 0.53
ATAD3A-201ENST00000339113 TMEM270Q6UE05 265 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms