RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 GTF3C6Q969F1 213 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 IFT74Q96LB3 600 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 CNTNAP3BQ96NU0 1288 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 CORO1BQ9BR76 489 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 KIFC3Q9BVG8 833 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 CNTNAP3Q9BZ76 1288 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 BRD9Q9H8M2 597 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 GMEB2Q9UKD1 530 aa12.63□□□□□ -0.39
CSMD2-202ENST00000338325 NDRG2Q9UN36 371 aaKnown RBP12.63□□□□□ -0.39
CSMD2-202ENST00000338325 WDR27A2RRH5 827 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 MAN2B1O00754 1011 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 ZNF197O14709 1029 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 ABLIM3O94929 683 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 RPA1P27694 616 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 GRM2Q14416 872 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 ZNF687Q8N1G0 1237 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 NSUN7Q8NE18 718 aaKnown RBP12.62□□□□□ -0.39
CSMD2-202ENST00000338325 TCEAL4Q96EI5 215 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 IER2Q9BTL4 223 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 CHRDQ9H2X0 955 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 ZFP14Q9HCL3 533 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 SLC38A7Q9NVC3 462 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 SMIM28A0A1B0GU29 152 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 SYN3O14994 580 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 MICAL2O94851 1124 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 LARGE1O95461 756 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 TDGF1P13385 188 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 ATF2P15336 505 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 MUTP22033 750 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 TGM1P22735 817 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 GRM5P41594 1212 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 YARSP54577 528 aaKnown RBP12.62□□□□□ -0.39
CSMD2-202ENST00000338325 NRLP54845 237 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 ARPP19P56211 112 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 SOX4Q06945 474 aaPredicted RBP12.62□□□□□ -0.39
CSMD2-202ENST00000338325 PPP2R5DQ14738 602 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 ME3Q16798 604 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 XKR4Q5GH76 650 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 FAM78AQ5JUQ0 283 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 PDZD4Q76G19 769 aaPredicted RBP12.62□□□□□ -0.39
CSMD2-202ENST00000338325 TCEAL8Q8IYN2 117 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 KIFAP3Q92845 792 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 ASB16Q96NS5 453 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 RTKNQ9BST9 563 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 TRMT61BQ9BVS5 477 aaKnown RBP12.62□□□□□ -0.39
CSMD2-202ENST00000338325 CCDC94Q9BW85 323 aaPredicted RBP12.62□□□□□ -0.39
CSMD2-202ENST00000338325 CYP4F11Q9HBI6 524 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 TOPORSQ9NS56 1045 aaPredicted RBP12.62□□□□□ -0.39
CSMD2-202ENST00000338325 RAB23Q9ULC3 237 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 TNFSF13BQ9Y275 285 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 INSL5Q9Y5Q6 135 aa12.62□□□□□ -0.39
CSMD2-202ENST00000338325 CACNA1BQ00975 2339 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 KMT2BQ9UMN6 2715 aaPredicted RBP12.61□□□□□ -0.39
CSMD2-202ENST00000338325 H7C4K7 107 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 PODXLO00592 558 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 OR52Z1P0C646 297 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 CCR2P41597 374 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 ANAPC15P60006 121 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 HAUS3Q68CZ6 603 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 ALKAL1Q6UXT8 129 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 MAMSTRQ6ZN01 415 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 ELMOD1Q8N336 334 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 CEP120Q8N960 986 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 IRF7Q92985 503 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 CDT1Q9H211 546 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 ZNF334Q9HCZ1 680 aaPredicted RBP12.61□□□□□ -0.39
CSMD2-202ENST00000338325 PARD6AQ9NPB6 346 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 TRPV5Q9NQA5 729 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 RALGAPA1Q6GYQ0 2036 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 PHLPP2Q6ZVD8 1323 aa12.61□□□□□ -0.39
CSMD2-202ENST00000338325 K7ERI5 159 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 JAK2O60674 1132 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 SEC24AO95486 1093 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 PSMC3P17980 439 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 GDI1P31150 447 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 CCR3P51677 355 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 ORC2Q13416 577 aaPredicted RBP12.6□□□□□ -0.39
CSMD2-202ENST00000338325 ZNF568Q3ZCX4 644 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 CYP4A22Q5TCH4 519 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 TPGS2Q68CL5 300 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 LAIR1Q6GTX8 287 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 IQCEQ6IPM2 695 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 VITQ6UXI7 678 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 MAP4K3Q8IVH8 894 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 DEPDC1BQ8WUY9 529 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 FAM3CQ92520 227 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 SMARCD2Q92925 531 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 ACO2Q99798 780 aaKnown RBP12.6□□□□□ -0.39
CSMD2-202ENST00000338325 BHMT2Q9H2M3 363 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 POLD4Q9HCU8 107 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 FBXL5Q9UKA1 691 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 PIAS3Q9Y6X2 628 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 MYH11P35749 1972 aa12.6□□□□□ -0.39
CSMD2-202ENST00000338325 NUP210Q8TEM1 1887 aaPredicted RBP12.59□□□□□ -0.39
CSMD2-202ENST00000338325 DCDC2BA2VCK2 349 aa12.59□□□□□ -0.39
CSMD2-202ENST00000338325 NRG2O14511 850 aaPredicted RBP12.59□□□□□ -0.39
CSMD2-202ENST00000338325 KCNE1P15382 129 aa12.59□□□□□ -0.39
CSMD2-202ENST00000338325 CCT6AP40227 531 aaKnown RBP12.59□□□□□ -0.39
CSMD2-202ENST00000338325 OSTNP61366 133 aa12.59□□□□□ -0.39
CSMD2-202ENST00000338325 MRPL58Q14197 206 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms