RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 DLATP10515 647 aaKnown RBP16.64■□□□□ 0.25
SEC13-201ENST00000337354 CTNNB1P35222 781 aa16.64■□□□□ 0.25
SEC13-201ENST00000337354 SLC11A1P49279 550 aa16.64■□□□□ 0.25
SEC13-201ENST00000337354 VAMP7P51809 220 aa16.64■□□□□ 0.25
SEC13-201ENST00000337354 TFAMQ00059 246 aaKnown RBP16.64■□□□□ 0.25
SEC13-201ENST00000337354 UPP1Q16831 310 aa16.64■□□□□ 0.25
SEC13-201ENST00000337354 EFCAB13Q8IY85 973 aa16.64■□□□□ 0.25
SEC13-201ENST00000337354 SLC39A11Q8N1S5 342 aa16.64■□□□□ 0.25
SEC13-201ENST00000337354 C18orf25Q96B23 403 aaPredicted RBP16.64■□□□□ 0.25
SEC13-201ENST00000337354 EEF2KMTQ96G04 330 aa16.64■□□□□ 0.25
SEC13-201ENST00000337354 CGRRF1Q99675 332 aa16.64■□□□□ 0.25
SEC13-201ENST00000337354 FUCA2Q9BTY2 467 aa16.64■□□□□ 0.25
SEC13-201ENST00000337354 HCSTQ9UBK5 93 aa16.64■□□□□ 0.25
SEC13-201ENST00000337354 ARMCX3Q9UH62 379 aaPredicted RBP16.64■□□□□ 0.25
SEC13-201ENST00000337354 PUF60Q9UHX1 559 aaKnown RBP16.64■□□□□ 0.25
SEC13-201ENST00000337354 RALGAPA2Q2PPJ7 1873 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 KIAA1671Q9BY89 1806 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 CASTOR2A6NHX0 329 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 H3BNC9 293 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 TMEM189-UBE2V1I3L0A0 370 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 STX10O60499 249 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 B4GALT3O60512 393 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 FGF18O76093 207 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 B3GAT3O94766 335 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 TNNC2P02585 160 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 TMEM191BP0C7N4 346 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 CLCNKBP51801 687 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 MARSP56192 900 aaKnown RBP16.63■□□□□ 0.25
SEC13-201ENST00000337354 WNT7BP56706 349 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 UBE3AQ05086 875 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 SOX4Q06945 474 aaPredicted RBP16.63■□□□□ 0.25
SEC13-201ENST00000337354 BFSP1Q12934 665 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 GRIN2CQ14957 1233 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 KLHL23Q8NBE8 558 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 FBXO22Q8NEZ5 403 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 ARNTL2Q8WYA1 636 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 TMEM169Q96HH4 297 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 IGSF21Q96ID5 467 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 CDX2Q99626 313 aaPredicted RBP16.63■□□□□ 0.25
SEC13-201ENST00000337354 BPIFA3Q9BQP9 254 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 PRDM12Q9H4Q4 367 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 DPP3Q9NY33 737 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 TUBGCP4Q9UGJ1 667 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 ITGA11Q9UKX5 1188 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 LZTS1Q9Y250 596 aa16.63■□□□□ 0.25
SEC13-201ENST00000337354 LRRIQ3A6PVS8 624 aaPredicted RBP16.62■□□□□ 0.25
SEC13-201ENST00000337354 NT5C1B-RDH14C9J2C7 533 aa16.62■□□□□ 0.25
SEC13-201ENST00000337354 PODXLO00592 558 aa16.62■□□□□ 0.25
SEC13-201ENST00000337354 PIRO00625 290 aa16.62■□□□□ 0.25
SEC13-201ENST00000337354 TADA2AO75478 443 aa16.62■□□□□ 0.25
SEC13-201ENST00000337354 FOSL2P15408 326 aa16.62■□□□□ 0.25
SEC13-201ENST00000337354 GTF2H1P32780 548 aa16.62■□□□□ 0.25
SEC13-201ENST00000337354 FAM114A1Q8IWE2 563 aa16.62■□□□□ 0.25
SEC13-201ENST00000337354 GAS2L1Q99501 681 aaPredicted RBP16.62■□□□□ 0.25
SEC13-201ENST00000337354 POP1Q99575 1024 aaKnown RBP16.62■□□□□ 0.25
SEC13-201ENST00000337354 GZF1Q9H116 711 aaPredicted RBP16.62■□□□□ 0.25
SEC13-201ENST00000337354 DNAJC25Q9H1X3 360 aa16.62■□□□□ 0.25
SEC13-201ENST00000337354 THAP9Q9H5L6 903 aa16.62■□□□□ 0.25
SEC13-201ENST00000337354 CERS4Q9HA82 394 aa16.62■□□□□ 0.25
SEC13-201ENST00000337354 MTUS1Q9ULD2 1270 aa16.62■□□□□ 0.25
SEC13-201ENST00000337354 R3HCC1Q9Y3T6 440 aaKnown RBP16.62■□□□□ 0.25
SEC13-201ENST00000337354 ANO9A1A5B4 782 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 TRAPPC3O43617 180 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 PBX3P40426 434 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 RBP5P82980 135 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 ELAVL2Q12926 359 aaKnown RBP16.61■□□□□ 0.25
SEC13-201ENST00000337354 GPM6BQ13491 265 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 CCDC40Q4G0X9 1142 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 ANO6Q4KMQ2 910 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 C9orf57Q5W0N0 161 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 C11orf57Q6ZUT1 292 aaPredicted RBP16.61■□□□□ 0.25
SEC13-201ENST00000337354 TRAPPC11Q7Z392 1133 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 DDX53Q86TM3 631 aaKnown RBP16.61■□□□□ 0.25
SEC13-201ENST00000337354 OR5B17Q8NGF7 314 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 PLEKHO2Q8TD55 490 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 PAAF1Q9BRP4 392 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 LMAN2LQ9H0V9 348 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 GOLGA2P5Q9HBQ8 144 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 ADAM28Q9UKQ2 775 aa16.61■□□□□ 0.25
SEC13-201ENST00000337354 PRG3Q9Y2Y8 225 aaPredicted RBP16.61■□□□□ 0.25
SEC13-201ENST00000337354 C4BPAP04003 597 aaKnown RBP16.6■□□□□ 0.25
SEC13-201ENST00000337354 ITGB1P05556 798 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 PRKCSHP14314 528 aaPredicted RBP16.6■□□□□ 0.25
SEC13-201ENST00000337354 PNPLA4P41247 253 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 DLG4P78352 724 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 MYL5Q02045 173 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 BMS1Q14692 1282 aaKnown RBP16.6■□□□□ 0.25
SEC13-201ENST00000337354 SPRED2Q7Z698 418 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 LRRC52Q8N7C0 313 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 C1orf127Q8N9H9 656 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 SPPL3Q8TCT6 385 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 ZNF516Q92618 1163 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 MTMR12Q9C0I1 747 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 MARCH5Q9NX47 278 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 STXBP5LQ9Y2K9 1186 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 NFE2L3Q9Y4A8 694 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 NUB1Q9Y5A7 615 aa16.6■□□□□ 0.25
SEC13-201ENST00000337354 FNDC1Q4ZHG4 1894 aaPredicted RBP16.59■□□□□ 0.25
SEC13-201ENST00000337354 SMTNL1A8MU46 457 aa16.59■□□□□ 0.25
SEC13-201ENST00000337354 KIF4AO95239 1232 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms