RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 CARD9Q9H257 536 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 DHX33Q9H6R0 707 aaKnown RBP9.46□□□□□ -0.9
SNCA-201ENST00000336904 MLXIPLQ9NP71 852 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 POLIQ9UNA4 740 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 MAFBQ9Y5Q3 323 aaPredicted RBP9.46□□□□□ -0.9
SNCA-201ENST00000336904 EVPLQ92817 2033 aa9.46□□□□□ -0.9
SNCA-201ENST00000336904 GOLGA8SH3BPF8 625 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 CAND2O75155 1236 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 PIAS1O75925 651 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 ACSL3O95573 720 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 C4BPAP04003 597 aaKnown RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 IQCF3P0C7M6 154 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 ZNF286BP0CG31 522 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 HSPA9P38646 679 aaKnown RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 NSFP46459 744 aaKnown RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 IRX5P78411 483 aaPredicted RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 NCOA4Q13772 614 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 PPP1R7Q15435 360 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 ZACNQ401N2 412 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 ALS2CLQ60I27 953 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 ACAD10Q6JQN1 1059 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 C1orf131Q8NDD1 294 aaKnown RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 WHAMMQ8TF30 809 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 MRRFQ96E11 262 aaKnown RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 CPB2Q96IY4 423 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 C12orf42Q96LP6 360 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 ERP44Q9BS26 406 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 DDX23Q9BUQ8 820 aaKnown RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 PSD3Q9NYI0 1048 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 LOXHD1Q8IVV2 1947 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 CCDC188H7C350 402 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 ITGBL1O95965 494 aaPredicted RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 MYZAPP0CAP1 466 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 TNFRSF8P28908 595 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 GTF2H1P32780 548 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 CUL2Q13617 745 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 MYBPC2Q14324 1141 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 SYCP2LQ5T4T6 812 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 ZDHHC24Q6UX98 284 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 SLC13A5Q86YT5 568 aaPredicted RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 MCOLN2Q8IZK6 566 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 EPS8L3Q8TE67 593 aaKnown RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 ATP6V1G3Q96LB4 118 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 RNPEPQ9H4A4 650 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 AZI2Q9H6S1 392 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 MAP3K20Q9NYL2 800 aaKnown RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 SAE1Q9UBE0 346 aaPredicted RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 PNMA2Q9UL42 364 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 GOLGA6L10A6NI86 522 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 H0YGN5 161 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 KIAA0391O15091 583 aaKnown RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 P4HA2O15460 535 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 ATP2C2O75185 946 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 ATF7P17544 494 aaPredicted RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 LAMTOR4Q0VGL1 99 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 SLC29A2Q14542 456 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 SMTNL2Q2TAL5 461 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 TMC2Q8TDI7 906 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 OPTNQ96CV9 577 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 CALR3Q96L12 384 aaKnown RBP9.45□□□□□ -0.9
SNCA-201ENST00000336904 SENP7Q9BQF6 1050 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 CXCL16Q9H2A7 254 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 ADAM22Q9P0K1 906 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 ASIC3Q9UHC3 531 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 GTF3C4Q9UKN8 822 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 COQ4Q9Y3A0 265 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 NFS1Q9Y697 457 aa9.45□□□□□ -0.9
SNCA-201ENST00000336904 E7EVH7 732 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 MYO1CO00159 1063 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 NDUFAB1O14561 156 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 PHF2O75151 1096 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 CNMDO75829 334 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 VTNP04004 478 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 CXCL8P10145 99 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 RALAP11233 206 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 ETS1P14921 441 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 CD19P15391 556 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 CHKAP35790 457 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 ARL2P36404 184 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 PTGIRP43119 386 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 OAZ1P54368 228 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 DYNLT1P63172 113 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 IFI35P80217 286 aaPredicted RBP9.44□□□□□ -0.9
SNCA-201ENST00000336904 CUL1Q13616 776 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 SGO2Q562F6 1265 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 DUPD1Q68J44 220 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 LRRN4Q8WUT4 740 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 CD101Q93033 1021 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 CDHR1Q96JP9 859 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 FGD4Q96M96 766 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 SELENOSQ9BQE4 189 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 SLITRK6Q9H5Y7 841 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 GRHL1Q9NZI5 618 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 RBPJLQ9UBG7 517 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 CTNNAL1Q9UBT7 734 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 TTC7AQ9ULT0 858 aaPredicted RBP9.44□□□□□ -0.9
SNCA-201ENST00000336904 NFASCO94856 1347 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 EIF3HO15372 352 aaKnown RBP eCLIP9.44□□□□□ -0.9
SNCA-201ENST00000336904 MAFGO15525 162 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 CYP1A2P05177 515 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms