RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CPA2P48052 419 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 AARSP49588 968 aaKnown RBP eCLIP8.74□□□□□ -1.01
HPS4-201ENST00000336873 ORC2Q13416 577 aaPredicted RBP8.74□□□□□ -1.01
HPS4-201ENST00000336873 KRT81Q14533 505 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 TUBB8Q3ZCM7 444 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 ZBTB41Q5SVQ8 909 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 C6orf118Q5T5N4 469 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 EPM2AIP1Q7L775 607 aaPredicted RBP8.74□□□□□ -1.01
HPS4-201ENST00000336873 RTKN2Q8IZC4 609 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 TMEM130Q8N3G9 435 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 NSUN6Q8TEA1 469 aaKnown RBP8.74□□□□□ -1.01
HPS4-201ENST00000336873 LENG9Q96B70 501 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 SMC6Q96SB8 1091 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 SHCBP1LQ9BZQ2 653 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 MYOZ2Q9NPC6 264 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 GDF3Q9NR23 364 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 TBC1D22BQ9NU19 505 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 PARP2Q9UGN5 583 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 VAV3Q9UKW4 847 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 PAPPAQ13219 1627 aa8.74□□□□□ -1.01
HPS4-201ENST00000336873 PHF2O75151 1096 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 HNRNPH3P31942 346 aaKnown RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 KIF22Q14807 665 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 GLRA4Q5JXX5 417 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 ANKRD20A3Q5VUR7 823 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 VPS52Q8N1B4 723 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 DCLK2Q8N568 766 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 PRELID2Q8N945 189 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 CEP120Q8N960 986 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 EPS8L1Q8TE68 723 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 KAT2BQ92831 832 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 OSBPL8Q9BZF1 889 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 PABPC3Q9H361 631 aaKnown RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 ATP6V0A4Q9HBG4 840 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 CPSF2Q9P2I0 782 aaKnown RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 TRIM33Q9UPN9 1127 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 DOCK2Q92608 1830 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 PODXLO00592 558 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 BAG2O95816 211 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 HOXA10P31260 410 aaPredicted RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 CHKAP35790 457 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 RPL7AP62424 266 aaKnown RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 NCOA4Q13772 614 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 ASTE1Q2TB18 679 aaPredicted RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 ZNF568Q3ZCX4 644 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 DARS2Q6PI48 645 aaKnown RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 APBB1IPQ7Z5R6 666 aaPredicted RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 NME8Q8N427 588 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 RBBP8NLQ8NC74 664 aaPredicted RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 CCNYQ8ND76 341 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 SYN2Q92777 582 aaPredicted RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 MCUR1Q96AQ8 359 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 CYTH2Q99418 400 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 PDCD2LQ9BRP1 358 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 CARD9Q9H257 536 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 SLC24A3Q9HC58 644 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 SLC40A1Q9NP59 571 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 ZNF302Q9NR11 478 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 SMYD2Q9NRG4 433 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 FAM49BQ9NUQ9 324 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 SEL1LQ9UBV2 794 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 HACL1Q9UJ83 578 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 TOGARAM1Q9Y4F4 1720 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 NUP98P52948 1817 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 MIF4GDA9UHW6 222 aaKnown RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 GGPS1O95749 300 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 MYCP01106 439 aaPredicted RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 PDHA1P08559 390 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 CFHP08603 1231 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 CLK2P49760 499 aaKnown RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 GMPSP49915 693 aaPredicted RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 ACTR2P61160 394 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 PSMC1P62191 440 aaKnown RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 Q4G0T1 1027 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 DALRD3Q5D0E6 543 aaKnown RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 CCDC60Q8IWA6 550 aaPredicted RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 DTX3LQ8TDB6 740 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 ACTRT1Q8TDG2 376 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 MAML1Q92585 1016 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 PRCCQ92733 491 aaPredicted RBP8.73□□□□□ -1.01
HPS4-201ENST00000336873 OLFML3Q9NRN5 406 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 GPATCH2LQ9NWQ4 482 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 PIM2Q9P1W9 311 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 SUGT1Q9Y2Z0 365 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 STK24Q9Y6E0 443 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 CASZ1Q86V15 1759 aa8.73□□□□□ -1.01
HPS4-201ENST00000336873 CFAP69A5D8W1 941 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 F8VP50 259 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 SLC16A3O15427 465 aaKnown RBP8.72□□□□□ -1.01
HPS4-201ENST00000336873 ENTPD3O75355 529 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 ALDH3A1P30838 453 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 CLCN3P51790 818 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 SLMAPQ14BN4 828 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 ZNF699Q32M78 642 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 MIS18BP1Q6P0N0 1132 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 KDELC2Q7Z4H8 507 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 PPM1NQ8N819 430 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 PARD3BQ8TEW8 1205 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 VTI1AQ96AJ9 217 aa8.72□□□□□ -1.01
HPS4-201ENST00000336873 GMCL1Q96IK5 515 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms