RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 RNF40O75150 1001 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 C22orf31O95567 290 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 CST3P01034 146 aaPredicted RBP17■□□□□ 0.31
PDGFB-201ENST00000331163 SERPING1P05155 500 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 CD52P31358 61 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 WNT7BP56706 349 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 MPZL3Q6UWV2 235 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 EPM2AIP1Q7L775 607 aaPredicted RBP17■□□□□ 0.31
PDGFB-201ENST00000331163 BTBD6Q96KE9 485 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 SIK3Q9Y2K2 1263 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 KAT6AQ92794 2004 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 MYH11P35749 1972 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 FRMD3A2A2Y4 597 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 GRAP2O75791 330 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 SLC26A2P50443 739 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 SCARA3Q6AZY7 606 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 LLGL2Q6P1M3 1020 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 MTG1Q9BT17 334 aaPredicted RBP17■□□□□ 0.31
PDGFB-201ENST00000331163 SRRDQ9UH36 339 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 MRPL42Q9Y6G3 142 aaKnown RBP17■□□□□ 0.31
PDGFB-201ENST00000331163 CEP104O60308 925 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 FTLP02792 175 aaPredicted RBP17■□□□□ 0.31
PDGFB-201ENST00000331163 RGS7P49802 495 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 MNAT1P51948 309 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 TAS1R3Q7RTX0 852 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 TRAPPC11Q7Z392 1133 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 SPIRE2Q8WWL2 714 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 TIPINQ9BVW5 301 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 KATNAL1Q9BW62 490 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 ACBD3Q9H3P7 528 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 C17orf75Q9HAS0 396 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 EHD2Q9NZN4 543 aa17■□□□□ 0.31
PDGFB-201ENST00000331163 ZMYM2Q9UBW7 1377 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 ZBBXA8MT70 800 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 ACKR2O00590 384 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 KCNK3O14649 394 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 GJB6O95452 261 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 IQCF3P0C7M6 154 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 ARL2P36404 184 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 NCKAP1LP55160 1127 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 TMEM132DQ14C87 1099 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 JADE1Q6IE81 842 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 EXOC8Q8IYI6 725 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 ABRAQ8N0Z2 381 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 NOX5Q96PH1 765 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 MED10Q9BTT4 135 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 NAA15Q9BXJ9 866 aaKnown RBP16.99■□□□□ 0.31
PDGFB-201ENST00000331163 ARHGAP28Q9P2N2 729 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 RRN3P2A6NIE6 340 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 ZNF865P0CJ78 1059 aaPredicted RBP16.99■□□□□ 0.31
PDGFB-201ENST00000331163 BRD2P25440 801 aaKnown RBP16.99■□□□□ 0.31
PDGFB-201ENST00000331163 PTENP60484 403 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 WDR59Q6PJI9 974 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 KLHL7Q8IXQ5 586 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 C18orf25Q96B23 403 aaPredicted RBP16.99■□□□□ 0.31
PDGFB-201ENST00000331163 GAD1Q99259 594 aa16.99■□□□□ 0.31
PDGFB-201ENST00000331163 EVPLQ92817 2033 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 ZNF185O15231 689 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 SLC16A3O15427 465 aaKnown RBP16.98■□□□□ 0.31
PDGFB-201ENST00000331163 SOX5P35711 763 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 CCT5P48643 541 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 CDO1Q16878 200 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 ZNF571Q7Z3V5 609 aaPredicted RBP16.98■□□□□ 0.31
PDGFB-201ENST00000331163 NAPGQ99747 312 aaPredicted RBP16.98■□□□□ 0.31
PDGFB-201ENST00000331163 ACO2Q99798 780 aaKnown RBP16.98■□□□□ 0.31
PDGFB-201ENST00000331163 CEP83Q9Y592 693 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 PHIPQ8WWQ0 1821 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 MMEP08473 750 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 FERP16591 822 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 ADORA2BP29275 332 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 ITGA7Q13683 1181 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 LRRC31Q6UY01 552 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 PEX26Q7Z412 305 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 TRPV1Q8NER1 839 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 UBA3Q8TBC4 463 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 FAM193BQ96PV7 902 aaPredicted RBP16.98■□□□□ 0.31
PDGFB-201ENST00000331163 NIFKQ9BYG3 293 aaKnown RBP16.98■□□□□ 0.31
PDGFB-201ENST00000331163 RNF39Q9H2S5 420 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 RCCD1A6NED2 376 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 FAM155AB1AL88 458 aaPredicted RBP16.98■□□□□ 0.31
PDGFB-201ENST00000331163 SEPT4O43236 478 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 RECQL4O94761 1208 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 NSFP46459 744 aaKnown RBP16.98■□□□□ 0.31
PDGFB-201ENST00000331163 SCYL2Q6P3W7 929 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 AFAP1L1Q8TED9 768 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 FAM149B1Q96BN6 582 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 MIS12Q9H081 205 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 TMEM8AQ9HCN3 771 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 NRCAMQ92823 1304 aa16.98■□□□□ 0.31
PDGFB-201ENST00000331163 H0YHG0 523 aa16.97■□□□□ 0.31
PDGFB-201ENST00000331163 ACAT1P24752 427 aaKnown RBP16.97■□□□□ 0.31
PDGFB-201ENST00000331163 GNA15P30679 374 aa16.97■□□□□ 0.31
PDGFB-201ENST00000331163 PAFAH1B1P43034 410 aa16.97■□□□□ 0.31
PDGFB-201ENST00000331163 ZNF211Q13398 564 aaPredicted RBP16.97■□□□□ 0.31
PDGFB-201ENST00000331163 TDRD10Q5VZ19 366 aaKnown RBP16.97■□□□□ 0.31
PDGFB-201ENST00000331163 GDF6Q6KF10 455 aaPredicted RBP16.97■□□□□ 0.31
PDGFB-201ENST00000331163 TAS2R14Q9NYV8 317 aa16.97■□□□□ 0.31
PDGFB-201ENST00000331163 MAGEA9P43362 315 aa16.97■□□□□ 0.31
PDGFB-201ENST00000331163 TBX2Q13207 712 aaPredicted RBP16.97■□□□□ 0.31
PDGFB-201ENST00000331163 NOTUMQ6P988 496 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms