RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 EIF4E1BA6NMX2 242 aaKnown RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 ZBTB22O15209 634 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 MSH4O15457 936 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 RHOBTB3O94955 611 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 SYF2O95926 243 aaKnown RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 CYP2C9P11712 490 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 ITGA4P13612 1032 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 SOX10P56693 466 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 GOLGA7BQ2TAP0 167 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 COBLL1Q53SF7 1204 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 NBPF12Q5TAG4 269 aaPredicted RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 TRIM72Q6ZMU5 477 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 FBXO16Q8IX29 292 aaPredicted RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 KCNQ5Q9NR82 932 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 PRRG1O14668 218 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 CTIFO43310 598 aaKnown RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 ITGB3P05106 788 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 RBP5P82980 135 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 ENOSF1Q7L5Y1 443 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 ZNF467Q7Z7K2 595 aaPredicted RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 SYT2Q8N9I0 419 aaPredicted RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 SPATA4Q8NEY3 305 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 LBHD1Q9BQE6 289 aaPredicted RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 TXLNGQ9NUQ3 528 aa10.74□□□□□ -0.69
CHD3-201ENST00000330494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.74□□□□□ -0.69
CHD3-201ENST00000330494 MAP3K6O95382 1288 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 ARP10275 920 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 BRAFP15056 766 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 GNL1P36915 607 aaPredicted RBP10.73□□□□□ -0.69
CHD3-201ENST00000330494 ACTR2P61160 394 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 C9orf131Q5VYM1 1079 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 A0A1W2PQC6 194 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 CFAP69A5D8W1 941 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 DDTLA6NHG4 134 aaPredicted RBP10.73□□□□□ -0.69
CHD3-201ENST00000330494 GUCY2CP25092 1073 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 NR1I3Q14994 352 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 P3H1Q32P28 736 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 PAN2Q504Q3 1202 aaKnown RBP10.73□□□□□ -0.69
CHD3-201ENST00000330494 POP1Q99575 1024 aaKnown RBP10.73□□□□□ -0.69
CHD3-201ENST00000330494 YY1AP1Q9H869 796 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 METTL5Q9NRN9 209 aaKnown RBP10.73□□□□□ -0.69
CHD3-201ENST00000330494 PPLO60437 1756 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 PDS5AQ29RF7 1337 aaKnown RBP10.73□□□□□ -0.69
CHD3-201ENST00000330494 A0A1B0GTH6 734 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 PLEKP08567 350 aaPredicted RBP10.73□□□□□ -0.69
CHD3-201ENST00000330494 DGKDQ16760 1214 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 GLE1Q53GS7 698 aaKnown RBP10.73□□□□□ -0.69
CHD3-201ENST00000330494 DCAF6Q58WW2 860 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 SLC7A14Q8TBB6 771 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 HASPINQ8TF76 798 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 TGS1Q96RS0 853 aaKnown RBP10.73□□□□□ -0.69
CHD3-201ENST00000330494 THEGQ9P2T0 379 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 MED24O75448 989 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 ANP32DO95626 131 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 CHRNA3P32297 505 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 ETFBP38117 255 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 IER5Q5VY09 327 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 CYP4F11Q9HBI6 524 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 DBR1Q9UK59 544 aaKnown RBP10.73□□□□□ -0.69
CHD3-201ENST00000330494 GRAMD1BQ3KR37 738 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 CEMIPQ8WUJ3 1361 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 PFASO15067 1338 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 SLC25A41Q8N5S1 370 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 PBXIP1Q96AQ6 731 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 ULK4Q96C45 1275 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 HAUS8Q9BT25 410 aa10.73□□□□□ -0.69
CHD3-201ENST00000330494 KRT38O76015 456 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 YY1P25490 414 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 LBRQ14739 615 aaKnown RBP10.72□□□□□ -0.69
CHD3-201ENST00000330494 TKFCQ3LXA3 575 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 ANKRD20A4Q4UJ75 823 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 ANKRD20A8PQ5CZ79 823 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 ANKRD20A2Q5SQ80 823 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 ANKRD20A1Q5TYW2 823 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 IL31Q6EBC2 164 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 GPAT2Q6NUI2 795 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 DDIASQ8IXT1 998 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 TRIM55Q9BYV6 548 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 WTIPA6NIX2 430 aaPredicted RBP10.72□□□□□ -0.69
CHD3-201ENST00000330494 GYG2O15488 501 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 CAP2P40123 477 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 THPOP40225 353 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 KCNJ6P48051 423 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 SLC18A3Q16572 532 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 ANKRD13AQ8IZ07 590 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 KCNV2Q8TDN2 545 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 KATNAL1Q9BW62 490 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 GPBP1L1Q9HC44 474 aaPredicted RBP10.72□□□□□ -0.69
CHD3-201ENST00000330494 ERAP1Q9NZ08 941 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 APOBEC2Q9Y235 224 aaKnown RBP10.72□□□□□ -0.69
CHD3-201ENST00000330494 hCG_2014768A0A024R1R8 64 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 SLC16A3O15427 465 aaKnown RBP10.72□□□□□ -0.69
CHD3-201ENST00000330494 MAGEA9P43362 315 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 HIF1AQ16665 826 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 LONRF1Q17RB8 773 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 DNAAF5Q86Y56 855 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 PABPC5Q96DU9 382 aaKnown RBP10.72□□□□□ -0.69
CHD3-201ENST00000330494 CCDC138Q96M89 665 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 TMEM106CQ9BVX2 250 aa10.72□□□□□ -0.69
CHD3-201ENST00000330494 RAB6BQ9NRW1 208 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms