RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 IL18RAPO95256 599 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 F2P00734 622 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 CST3P01034 146 aaPredicted RBP16.02■□□□□ 0.15
TPM3-205ENST00000328159 TUBBP07437 444 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 TFAMQ00059 246 aaKnown RBP16.02■□□□□ 0.15
TPM3-205ENST00000328159 CRHR2Q13324 411 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 SCARA3Q6AZY7 606 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 CC2D1AQ6P1N0 951 aaPredicted RBP16.02■□□□□ 0.15
TPM3-205ENST00000328159 ZNF410Q86VK4 478 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 EFCAB13Q8IY85 973 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 KAT2BQ92831 832 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 CCDC102AQ96A19 550 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 LENG1Q96BZ8 264 aaPredicted RBP16.02■□□□□ 0.15
TPM3-205ENST00000328159 CPB2Q96IY4 423 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 PBKQ96KB5 322 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 CCDC94Q9BW85 323 aaPredicted RBP16.02■□□□□ 0.15
TPM3-205ENST00000328159 CTTNBP2NLQ9P2B4 639 aa16.02■□□□□ 0.15
TPM3-205ENST00000328159 KCNK3O14649 394 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 TNPO2O14787 897 aaKnown RBP16.01■□□□□ 0.15
TPM3-205ENST00000328159 CALCAP01258 141 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 TNNC2P02585 160 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 TMEM191BP0C7N4 346 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 STAG3L1P0CL83 205 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 SMIM10L2AP0DMW4 78 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 SMIM10L2BP0DMW5 78 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 CXCL8P10145 99 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 ARF4P18085 180 aaPredicted RBP16.01■□□□□ 0.15
TPM3-205ENST00000328159 MYL6P60660 151 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 PTPROQ16827 1216 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 CLEC16AQ2KHT3 1053 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 ACAD10Q6JQN1 1059 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 TMEM192Q8IY95 271 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 ANKRD36BP1Q96IX9 119 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 ABCB6Q9NP58 842 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 RNF216Q9NWF9 866 aaPredicted RBP16.01■□□□□ 0.15
TPM3-205ENST00000328159 AMFRQ9UKV5 643 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 CNTN6Q9UQ52 1028 aa16.01■□□□□ 0.15
TPM3-205ENST00000328159 TARSL2A2RTX5 802 aaKnown RBP16■□□□□ 0.15
TPM3-205ENST00000328159 TSPAN1O60635 241 aa16■□□□□ 0.15
TPM3-205ENST00000328159 ZRANB2O95218 330 aaKnown RBP eCLIP16■□□□□ 0.15
TPM3-205ENST00000328159 IGHA2P01877 340 aa16■□□□□ 0.15
TPM3-205ENST00000328159 TRPC3Q13507 836 aa16■□□□□ 0.15
TPM3-205ENST00000328159 SGSM1Q2NKQ1 1148 aa16■□□□□ 0.15
TPM3-205ENST00000328159 WDR93Q6P2C0 686 aa16■□□□□ 0.15
TPM3-205ENST00000328159 TMEM270Q6UE05 265 aa16■□□□□ 0.15
TPM3-205ENST00000328159 UBR7Q8N806 425 aa16■□□□□ 0.15
TPM3-205ENST00000328159 RBBP8NLQ8NC74 664 aaPredicted RBP16■□□□□ 0.15
TPM3-205ENST00000328159 HES6Q96HZ4 224 aa16■□□□□ 0.15
TPM3-205ENST00000328159 AP5M1Q9H0R1 490 aa16■□□□□ 0.15
TPM3-205ENST00000328159 NRCAMQ92823 1304 aa16■□□□□ 0.15
TPM3-205ENST00000328159 MTA2O94776 668 aa16■□□□□ 0.15
TPM3-205ENST00000328159 ERLIN2O94905 339 aa16■□□□□ 0.15
TPM3-205ENST00000328159 SEC31AO94979 1220 aaKnown RBP16■□□□□ 0.15
TPM3-205ENST00000328159 CYP1A2P05177 515 aa16■□□□□ 0.15
TPM3-205ENST00000328159 PSEN2P49810 448 aa16■□□□□ 0.15
TPM3-205ENST00000328159 CPT1AP50416 773 aa16■□□□□ 0.15
TPM3-205ENST00000328159 VSNL1P62760 191 aa16■□□□□ 0.15
TPM3-205ENST00000328159 POU5F1Q01860 360 aaKnown RBP16■□□□□ 0.15
TPM3-205ENST00000328159 MFSD10Q14728 455 aa16■□□□□ 0.15
TPM3-205ENST00000328159 KYAT1Q16773 422 aa16■□□□□ 0.15
TPM3-205ENST00000328159 CCDC70Q6NSX1 233 aa16■□□□□ 0.15
TPM3-205ENST00000328159 ZNF653Q96CK0 615 aa16■□□□□ 0.15
TPM3-205ENST00000328159 ARFGAP3Q9NP61 516 aa16■□□□□ 0.15
TPM3-205ENST00000328159 GTF3C4Q9UKN8 822 aa16■□□□□ 0.15
TPM3-205ENST00000328159 Q9Y3F1 56 aa16■□□□□ 0.15
TPM3-205ENST00000328159 ERLIN1O75477 346 aa15.99■□□□□ 0.15
TPM3-205ENST00000328159 TM4SF4P48230 202 aa15.99■□□□□ 0.15
TPM3-205ENST00000328159 IRX5P78411 483 aaPredicted RBP15.99■□□□□ 0.15
TPM3-205ENST00000328159 C11orf63Q6NUN7 778 aa15.99■□□□□ 0.15
TPM3-205ENST00000328159 HNRNPLLQ8WVV9 542 aaKnown RBP15.99■□□□□ 0.15
TPM3-205ENST00000328159 SELENOOQ9BVL4 669 aa15.99■□□□□ 0.15
TPM3-205ENST00000328159 NIF3L1Q9GZT8 377 aa15.99■□□□□ 0.15
TPM3-205ENST00000328159 FAM49AQ9H0Q0 323 aaPredicted RBP15.99■□□□□ 0.15
TPM3-205ENST00000328159 ADAMTS10Q9H324 1103 aa15.99■□□□□ 0.15
TPM3-205ENST00000328159 RBM12Q9NTZ6 932 aaKnown RBP15.99■□□□□ 0.15
TPM3-205ENST00000328159 ABT1Q9ULW3 272 aaKnown RBP15.99■□□□□ 0.15
TPM3-205ENST00000328159 SMIM35A0A1B0GVV1 85 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 MBLAC1A4D2B0 266 aaPredicted RBP15.98■□□□□ 0.15
TPM3-205ENST00000328159 LACTBL1A8MY62 500 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 HAS3O00219 553 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 MEFVO15553 781 aaPredicted RBP15.98■□□□□ 0.15
TPM3-205ENST00000328159 ATMINO43313 823 aaPredicted RBP15.98■□□□□ 0.15
TPM3-205ENST00000328159 CEP104O60308 925 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 MYL3P08590 195 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 UNGP13051 313 aaPredicted RBP15.98■□□□□ 0.15
TPM3-205ENST00000328159 MCM3P25205 808 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 CTGFP29279 349 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 GNA15P30679 374 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 ZNF132P52740 706 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 CDC42EP1Q00587 391 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 KIZQ2M2Z5 673 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 ZNF699Q32M78 642 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 PPP1R13LQ8WUF5 828 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 A0A1B0GUA9 196 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 DDX3YO15523 660 aaKnown RBP15.98■□□□□ 0.15
TPM3-205ENST00000328159 CA12O43570 354 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 CYP1A1P04798 512 aaPredicted RBP15.98■□□□□ 0.15
TPM3-205ENST00000328159 NFICP08651 508 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 CYP2C9P11712 490 aa15.98■□□□□ 0.15
TPM3-205ENST00000328159 BEX3Q00994 111 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms