RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 EPC2Q52LR7 807 aa19.45■□□□□ 0.7
SYNE4-201ENST00000324444 FBXO47Q5MNV8 452 aa19.45■□□□□ 0.7
SYNE4-201ENST00000324444 CYP26C1Q6V0L0 522 aa19.45■□□□□ 0.7
SYNE4-201ENST00000324444 SPAG5Q96R06 1193 aa19.45■□□□□ 0.7
SYNE4-201ENST00000324444 TMX1Q9H3N1 280 aa19.45■□□□□ 0.7
SYNE4-201ENST00000324444 APEX2Q9UBZ4 518 aa19.45■□□□□ 0.7
SYNE4-201ENST00000324444 ST3GAL5Q9UNP4 418 aa19.45■□□□□ 0.7
SYNE4-201ENST00000324444 R3HCC1Q9Y3T6 440 aaKnown RBP19.45■□□□□ 0.7
SYNE4-201ENST00000324444 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.45■□□□□ 0.7
SYNE4-201ENST00000324444 MYO9BQ13459 2157 aa19.45■□□□□ 0.7
SYNE4-201ENST00000324444 XPOTO43592 962 aaKnown RBP19.44■□□□□ 0.7
SYNE4-201ENST00000324444 C4BPAP04003 597 aaKnown RBP19.44■□□□□ 0.7
SYNE4-201ENST00000324444 ATP2A2P16615 1042 aaKnown RBP19.44■□□□□ 0.7
SYNE4-201ENST00000324444 FGFR4P22455 802 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 HNRNPH3P31942 346 aaKnown RBP19.44■□□□□ 0.7
SYNE4-201ENST00000324444 RABGGTBP53611 331 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 POLR2FP61218 127 aaKnown RBP19.44■□□□□ 0.7
SYNE4-201ENST00000324444 CDK17Q00537 523 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 TWF2Q6IBS0 349 aaKnown RBP19.44■□□□□ 0.7
SYNE4-201ENST00000324444 C15orf39Q6ZRI6 1047 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 TET1Q8NFU7 2136 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 FAM212AQ96EL1 285 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 NT5C1BQ96P26 610 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 TRAIPQ9BWF2 469 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 NKX2-4Q9H2Z4 354 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 PLAGL2Q9UPG8 496 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 YBX2Q9Y2T7 364 aaKnown RBP19.44■□□□□ 0.7
SYNE4-201ENST00000324444 C2CD2Q9Y426 696 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 PRUNE2Q8WUY3 3088 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 CCP110O43303 1012 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 FECHP22830 423 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 TNFSF9P41273 254 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 KLK7P49862 253 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 NFX1Q12986 1120 aaKnown RBP19.44■□□□□ 0.7
SYNE4-201ENST00000324444 MBTPS1Q14703 1052 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 ZBTB41Q5SVQ8 909 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 RRAGAQ7L523 313 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 CDR2LQ86X02 465 aaPredicted RBP19.44■□□□□ 0.7
SYNE4-201ENST00000324444 MAFAQ8NHW3 353 aaPredicted RBP19.44■□□□□ 0.7
SYNE4-201ENST00000324444 TAF4BQ92750 862 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 FAXDC2Q96IV6 333 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 POP1Q99575 1024 aaKnown RBP19.44■□□□□ 0.7
SYNE4-201ENST00000324444 STK33Q9BYT3 514 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 OSBPL7Q9BZF2 842 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 GANQ9H2C0 597 aa19.44■□□□□ 0.7
SYNE4-201ENST00000324444 BZW2Q9Y6E2 419 aaKnown RBP19.44■□□□□ 0.7
SYNE4-201ENST00000324444 NOL4O94818 638 aa19.43■□□□□ 0.7
SYNE4-201ENST00000324444 PIK3CAP42336 1068 aa19.43■□□□□ 0.7
SYNE4-201ENST00000324444 MFAP3P55082 362 aa19.43■□□□□ 0.7
SYNE4-201ENST00000324444 OSTNP61366 133 aa19.43■□□□□ 0.7
SYNE4-201ENST00000324444 TRPC3Q13507 836 aa19.43■□□□□ 0.7
SYNE4-201ENST00000324444 LPIN1Q14693 890 aa19.43■□□□□ 0.7
SYNE4-201ENST00000324444 SEZ6Q53EL9 994 aa19.43■□□□□ 0.7
SYNE4-201ENST00000324444 SFMBT2Q5VUG0 894 aa19.43■□□□□ 0.7
SYNE4-201ENST00000324444 PDXDC1Q6P996 788 aa19.43■□□□□ 0.7
SYNE4-201ENST00000324444 LMO3Q8TAP4 145 aa19.43■□□□□ 0.7
SYNE4-201ENST00000324444 JAKMIP2Q96AA8 810 aa19.43■□□□□ 0.7
SYNE4-201ENST00000324444 AGO3Q9H9G7 860 aaKnown RBP19.43■□□□□ 0.7
SYNE4-201ENST00000324444 ERVK-5Q9HDB9 667 aa19.43■□□□□ 0.7
SYNE4-201ENST00000324444 GBF1Q92538 1859 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 BAIAP3O94812 1187 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 CXCL8P10145 99 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 MYOGP15173 224 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 STAT1P42224 750 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 CCZ1BP86790 482 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 CCZ1P86791 482 aaPredicted RBP19.42■□□□□ 0.7
SYNE4-201ENST00000324444 GPNMBQ14956 572 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 MEA1Q16626 185 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 SGSM1Q2NKQ1 1148 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 CCDC170Q8IYT3 715 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 FTHL17Q9BXU8 183 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 KCNF1Q9H3M0 494 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 SLC28A3Q9HAS3 691 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 SIX2Q9NPC8 291 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 UBN1Q9NPG3 1134 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 C1orf112Q9NSG2 853 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 RNF216Q9NWF9 866 aaPredicted RBP19.42■□□□□ 0.7
SYNE4-201ENST00000324444 AIPL1Q9NZN9 384 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 DNAJC12Q9UKB3 198 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 PADI3Q9ULW8 664 aa19.42■□□□□ 0.7
SYNE4-201ENST00000324444 CHD7Q9P2D1 2997 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 LACTBL1A8MY62 500 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 NBNO60934 754 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 GHRP10912 638 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 FERP16591 822 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 TBXAS1P24557 533 aaPredicted RBP19.41■□□□□ 0.7
SYNE4-201ENST00000324444 TFAMQ00059 246 aaKnown RBP19.41■□□□□ 0.7
SYNE4-201ENST00000324444 TMEM132DQ14C87 1099 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 SLC10A6Q3KNW5 377 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 TRAPPC11Q7Z392 1133 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 CEP120Q8N960 986 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 BAP1Q92560 729 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 ZNF516Q92618 1163 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 PGBD4Q96DM1 585 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 ZNF830Q96NB3 372 aaPredicted RBP19.41■□□□□ 0.7
SYNE4-201ENST00000324444 PRDM12Q9H4Q4 367 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 NLRC4Q9NPP4 1024 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 PCDHA11Q9Y5I1 949 aa19.41■□□□□ 0.7
SYNE4-201ENST00000324444 ANK1P16157 1881 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 LRRC53A6NM62 1247 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms