RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NPM3O75607 178 aaKnown RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 HSD17B4P51659 736 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 PDK1Q15118 436 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 PWP2Q15269 919 aaKnown RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 ZNF699Q32M78 642 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 LRRC31Q6UY01 552 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 TBC1D1Q86TI0 1168 aaPredicted RBP9.28□□□□□ -0.92
COL6A5-202ENST00000312481 WDR24Q96S15 920 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 ECT2Q9H8V3 914 aa9.28□□□□□ -0.92
COL6A5-202ENST00000312481 PPEF1O14829 653 aaPredicted RBP9.27□□□□□ -0.92
COL6A5-202ENST00000312481 DLATP10515 647 aaKnown RBP9.27□□□□□ -0.92
COL6A5-202ENST00000312481 SPRP35270 261 aaPredicted RBP9.27□□□□□ -0.92
COL6A5-202ENST00000312481 WLSQ5T9L3 541 aa9.27□□□□□ -0.92
COL6A5-202ENST00000312481 DNAAF3Q8N9W5 541 aa9.27□□□□□ -0.92
COL6A5-202ENST00000312481 AFG3L2Q9Y4W6 797 aa9.27□□□□□ -0.92
COL6A5-202ENST00000312481 PCDHGC5Q9Y5F6 944 aa9.27□□□□□ -0.92
COL6A5-202ENST00000312481 PRRG3Q9BZD7 231 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 NYAP2Q9P242 653 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 DISP2A7MBM2 1401 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 SHROOM3Q8TF72 1996 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 TRDMT1O14717 391 aaKnown RBP9.27□□□□□ -0.93
COL6A5-202ENST00000312481 APOL1O14791 398 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 ENTPD3O75355 529 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 LTKP29376 864 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 KCTD2Q14681 263 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 LRRC24Q50LG9 513 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 SLC30A5Q8TAD4 765 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 ANKRD6Q9Y2G4 727 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 ENC1O14682 589 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 DRAP1Q14919 205 aaPredicted RBP9.27□□□□□ -0.93
COL6A5-202ENST00000312481 ZNF827Q17R98 1081 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 CCDC153Q494R4 210 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 TFDP3Q5H9I0 405 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 MYCBPAPQ8TBZ2 947 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 SDR42E1Q8WUS8 393 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 HDAC11Q96DB2 347 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 NSL1Q96IY1 281 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 TRABDQ9H4I3 376 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 TIMMDC1Q9NPL8 285 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 AVENQ9NQS1 362 aaPredicted RBP9.27□□□□□ -0.93
COL6A5-202ENST00000312481 TFCP2L1Q9NZI6 479 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 EFR3BQ9Y2G0 817 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 GAKO14976 1311 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 RPL26P61254 145 aaKnown RBP9.27□□□□□ -0.93
COL6A5-202ENST00000312481 IRX5P78411 483 aaPredicted RBP9.27□□□□□ -0.93
COL6A5-202ENST00000312481 PDCLQ13371 301 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 NXNQ6DKJ4 435 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 LCORLQ8N3X6 602 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 KYAT3Q6YP21 454 aaKnown RBP9.27□□□□□ -0.93
COL6A5-202ENST00000312481 ZNF555Q8NEP9 628 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 BEST2Q8NFU1 509 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 STARD8Q92502 1023 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 JARID2Q92833 1246 aaPredicted RBP9.27□□□□□ -0.93
COL6A5-202ENST00000312481 CEP170P1Q96L14 293 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 MYL10Q9BUA6 226 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 ZFATQ9P243 1243 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 PSMA3P25788 255 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 GEMIN4P57678 1058 aaKnown RBP9.27□□□□□ -0.93
COL6A5-202ENST00000312481 LARGE2Q8N3Y3 721 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 PTPN22Q9Y2R2 807 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 RGPD2P0DJD1 1756 aa9.27□□□□□ -0.93
COL6A5-202ENST00000312481 C1orf167Q5SNV9 1468 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PNMA8CA0A1B0GUJ8 204 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 GSG1L2A8MUP6 293 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 ACSL3O95573 720 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 OSBPP22059 807 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 C1QBPQ07021 282 aaKnown RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 MTMR1Q13613 665 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PSPC1Q8WXF1 523 aaKnown RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 NR1H4Q96RI1 486 aaPredicted RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 FHOD1Q9Y613 1164 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 RAD54BQ9Y620 910 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PRR36Q9H6K5 1346 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 SMIM31A0A1B0GVY4 71 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 GDF11O95390 407 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 CD4P01730 458 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 ITGA9Q13797 1035 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 GRAMD1BQ3KR37 738 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 LRRC38Q5VT99 294 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PRR23CQ6ZRP0 262 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 TPCN2Q8NHX9 752 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 SAYSD1Q9NPB0 183 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PPARGC1AQ9UBK2 798 aaKnown RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 SYCE1LA8MT33 242 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 POLD2P49005 469 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 ATAD3BQ5T9A4 648 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 UGT3A1Q6NUS8 523 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 TRIM63Q969Q1 353 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 TADA1Q96BN2 335 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 FAM212AQ96EL1 285 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 DBR1Q9UK59 544 aaKnown RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 C19orf81C9J6K1 198 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 MAP2K7O14733 419 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 KRT14P02533 472 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 ADORA1P30542 326 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 VSNL1P62760 191 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 BASP1P80723 227 aaKnown RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 ZNF200P98182 395 aaPredicted RBP9.26□□□□□ -0.93
COL6A5-202ENST00000312481 PTK6Q13882 451 aa9.26□□□□□ -0.93
COL6A5-202ENST00000312481 C12orf60Q5U649 245 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms