RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 HSPA13P48723 471 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 USP11P51784 963 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 PSMC5P62195 406 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 GRAPQ13588 217 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 COBLL1Q53SF7 1204 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 RCSD1Q6JBY9 416 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 TRAF7Q6Q0C0 670 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 MICU2Q8IYU8 434 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 PPHLN1Q8NEY8 458 aaKnown RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 GRAPLQ8TC17 118 aaPredicted RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 SNRNP27Q8WVK2 155 aaKnown RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 EIF2AK1Q9BQI3 630 aaKnown RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 KLHL11Q9NVR0 708 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 XPO7Q9UIA9 1087 aaKnown RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 FAM32AQ9Y421 112 aaKnown RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 E7ENQ6 273 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 UCHL3P15374 230 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 MAGEA4P43358 317 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 DUOXA2Q1HG44 320 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 PRPF39Q86UA1 669 aaKnown RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 C3orf20Q8ND61 904 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 PHF21AQ96BD5 680 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 ARHGEF26Q96DR7 871 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 SCN3BQ9NY72 215 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 STMN3Q9NZ72 180 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 SMARCAL1Q9NZC9 954 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 NDUFA13Q9P0J0 144 aa14.38□□□□□ -0.11
CLCN6-201ENST00000312413 AGO2Q9UKV8 859 aaKnown RBP14.38□□□□□ -0.11
CLCN6-201ENST00000312413 SNRPAP09012 282 aaKnown RBP14.37□□□□□ -0.11
CLCN6-201ENST00000312413 ATXN3P54252 364 aaPredicted RBP14.37□□□□□ -0.11
CLCN6-201ENST00000312413 DPYDQ12882 1025 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 PDIA5Q14554 519 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 USP38Q8NB14 1042 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 OTULINQ96BN8 352 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 RHBDL2Q9NX52 303 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 TMEM161AQ9NX61 479 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 EYA4O95677 639 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 AASDHQ4L235 1098 aaPredicted RBP14.37□□□□□ -0.11
CLCN6-201ENST00000312413 GANCQ8TET4 914 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 CLMNQ96JQ2 1002 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 ZFYVE19Q96K21 471 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 SENP7Q9BQF6 1050 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 POLR3FQ9H1D9 316 aaPredicted RBP14.37□□□□□ -0.11
CLCN6-201ENST00000312413 MANSC1Q9H8J5 431 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 EXOSC4Q9NPD3 245 aaKnown RBP14.37□□□□□ -0.11
CLCN6-201ENST00000312413 TUBE1Q9UJT0 475 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 CDYLQ9Y232 598 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 CAB39Q9Y376 341 aaPredicted RBP14.37□□□□□ -0.11
CLCN6-201ENST00000312413 ARHGEF5Q12774 1597 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 A8MXQ7 604 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 ATP6V1B1P15313 513 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 ADORA2BP29275 332 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 TRIM16LQ309B1 348 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 DDHD1Q8NEL9 900 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 RFWD2Q8NHY2 731 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 ASAP3Q8TDY4 903 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 TSPAN17Q96FV3 270 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 CNBD2Q96M20 576 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 MOV10L1Q9BXT6 1211 aaKnown RBP14.37□□□□□ -0.11
CLCN6-201ENST00000312413 OSBPL8Q9BZF1 889 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 SIK2Q9H0K1 926 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 TMEM245Q9H330 911 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 ZNF556Q9HAH1 456 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 ZNF302Q9NR11 478 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 GABBR1Q9UBS5 961 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 TSR3Q9UJK0 312 aaKnown RBP14.37□□□□□ -0.11
CLCN6-201ENST00000312413 UTYO14607 1347 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 C3orf70A6NLC5 250 aaPredicted RBP14.37□□□□□ -0.11
CLCN6-201ENST00000312413 NFIBO00712 420 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 WEE2P0C1S8 567 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 TCN1P20061 433 aaPredicted RBP14.37□□□□□ -0.11
CLCN6-201ENST00000312413 USP10Q14694 798 aaKnown RBP14.37□□□□□ -0.11
CLCN6-201ENST00000312413 KDM7AQ6ZMT4 941 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 BARGINQ6ZT62 677 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 C18orf8Q96DM3 657 aa14.37□□□□□ -0.11
CLCN6-201ENST00000312413 SMAPO00193 183 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 MYL2P10916 166 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 PRDX5P30044 214 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 SUSD4Q5VX71 490 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 NSUN6Q8TEA1 469 aaKnown RBP14.36□□□□□ -0.11
CLCN6-201ENST00000312413 TASP1Q9H6P5 420 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 CDY2AQ9Y6F7 541 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 CDY1Q9Y6F8 540 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 PDE5AO76074 875 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 RHOBTB3O94955 611 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 HSD17B4P51659 736 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 DSG1Q02413 1049 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 ZCWPW2Q504Y3 356 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 NYAP1Q6ZVC0 841 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 DDX42Q86XP3 938 aaKnown RBP eCLIP14.36□□□□□ -0.11
CLCN6-201ENST00000312413 CAAP1Q9H8G2 361 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 MOSPD1Q9UJG1 213 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 FEM1BQ9UK73 627 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 ITM2BQ9Y287 266 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 MYO1GB0I1T2 1018 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 CAND2O75155 1236 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 IGKV5-2P06315 115 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 C3orf62Q6ZUJ4 267 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 E2F7Q96AV8 911 aa14.36□□□□□ -0.11
CLCN6-201ENST00000312413 SPON2Q9BUD6 331 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms