RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 EML3Q32P44 896 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 THEMIS2Q5TEJ8 643 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 ZNF662Q6ZS27 426 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 ZC3H18Q86VM9 953 aaKnown RBP15.5■□□□□ 0.07
PTPN9-201ENST00000306726 MAML1Q92585 1016 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 DNAJC18Q9H819 358 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 CCPG1Q9ULG6 757 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 PCDHB4Q9Y5E5 795 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 UNCXA6NJT0 531 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 ZBED4O75132 1171 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 KRT19P08727 400 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 CHRNA3P32297 505 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 SWT1Q5T5J6 900 aaKnown RBP15.5■□□□□ 0.07
PTPN9-201ENST00000306726 HAUS6Q7Z4H7 955 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 ZBTB33Q86T24 672 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 SYN2Q92777 582 aaPredicted RBP15.5■□□□□ 0.07
PTPN9-201ENST00000306726 PRR12Q9ULL5 1215 aa15.5■□□□□ 0.07
PTPN9-201ENST00000306726 EYA4O95677 639 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 GCLCP48506 637 aaPredicted RBP15.49■□□□□ 0.07
PTPN9-201ENST00000306726 ATXN3P54252 364 aaPredicted RBP15.49■□□□□ 0.07
PTPN9-201ENST00000306726 BASP1P80723 227 aaKnown RBP15.49■□□□□ 0.07
PTPN9-201ENST00000306726 RASA3Q14644 834 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 PPP4R3CPQ6ZMV5 832 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 FITM2Q8N6M3 262 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 PPP1R14CQ8TAE6 165 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 CALR3Q96L12 384 aaKnown RBP15.49■□□□□ 0.07
PTPN9-201ENST00000306726 NT5C1BQ96P26 610 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 LRRC37BQ96QE4 947 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 IQCGQ9H095 443 aaKnown RBP15.49■□□□□ 0.07
PTPN9-201ENST00000306726 GGA3Q9NZ52 723 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 HSPBP1Q9NZL4 362 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 WRAP73Q9P2S5 460 aaPredicted RBP15.49■□□□□ 0.07
PTPN9-201ENST00000306726 NAALADL1Q9UQQ1 740 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 SYNGAP1Q96PV0 1343 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 NRLP54845 237 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 CNGA2Q16280 664 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 ANGEL2Q5VTE6 544 aaKnown RBP15.49■□□□□ 0.07
PTPN9-201ENST00000306726 ZDHHC14Q8IZN3 488 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 ZNF341Q9BYN7 854 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 SIX2Q9NPC8 291 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 GINS2Q9Y248 185 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 NID2Q14112 1375 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 hCG_2014768A0A024R1R8 64 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 LRRIQ4A6NIV6 560 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 ALDH3A1P30838 453 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 KIF22Q14807 665 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 DUPD1Q68J44 220 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 TATDN1Q6P1N9 297 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 TTC8Q8TAM2 541 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 TRPM4Q8TD43 1214 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 HES6Q96HZ4 224 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 RILPQ96NA2 401 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 NACC1Q96RE7 527 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 DDX50Q9BQ39 737 aaKnown RBP15.49■□□□□ 0.07
PTPN9-201ENST00000306726 YY1AP1Q9H869 796 aa15.49■□□□□ 0.07
PTPN9-201ENST00000306726 RAVER2Q9HCJ3 691 aaKnown RBP15.49■□□□□ 0.07
PTPN9-201ENST00000306726 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.48■□□□□ 0.07
PTPN9-201ENST00000306726 DENND3A2RUS2 1198 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 DDX3YO15523 660 aaKnown RBP15.48■□□□□ 0.07
PTPN9-201ENST00000306726 CSDE1O75534 798 aaKnown RBP15.48■□□□□ 0.07
PTPN9-201ENST00000306726 CETN2P41208 172 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 CCNHP51946 323 aaPredicted RBP15.48■□□□□ 0.07
PTPN9-201ENST00000306726 STAT2P52630 851 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 COPS2P61201 443 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 SLMAPQ14BN4 828 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 ARMC3Q5W041 872 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 TMEM179Q6ZVK1 233 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 XXYLT1Q8NBI6 393 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 TTC1Q99614 292 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 TEKT3Q9BXF9 490 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 CARD9Q9H257 536 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 UNC45AQ9H3U1 944 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 FZD1Q9UP38 647 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.48■□□□□ 0.07
PTPN9-201ENST00000306726 ATP2A2P16615 1042 aaKnown RBP15.48■□□□□ 0.07
PTPN9-201ENST00000306726 IL9RQ01113 521 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 PDIA2Q13087 525 aaKnown RBP15.48■□□□□ 0.07
PTPN9-201ENST00000306726 RHOT2Q8IXI1 618 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 SLC25A41Q8N5S1 370 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 AGR3Q8TD06 166 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 SMC6Q96SB8 1091 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 DEFB129Q9H1M3 183 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 MCM8Q9UJA3 840 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 RPTORQ8N122 1335 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 YWHAGP61981 247 aaKnown RBP eCLIP15.48■□□□□ 0.07
PTPN9-201ENST00000306726 FASTKD3Q14CZ7 662 aaKnown RBP15.48■□□□□ 0.07
PTPN9-201ENST00000306726 FAXCQ5TGI0 409 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 MREGQ8N565 214 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 WDR18Q9BV38 432 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 GLIS2Q9BZE0 524 aaPredicted RBP15.48■□□□□ 0.07
PTPN9-201ENST00000306726 SLC13A1Q9BZW2 595 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 ARMCX1Q9P291 453 aa15.48■□□□□ 0.07
PTPN9-201ENST00000306726 NXF1Q9UBU9 619 aaKnown RBP15.48■□□□□ 0.07
PTPN9-201ENST00000306726 SNX3O60493 162 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 KRT1P04264 644 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 MPP2Q14168 576 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 CDO1Q16878 200 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 MTERF2Q49AM1 385 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 WDR44Q5JSH3 913 aa15.47■□□□□ 0.07
PTPN9-201ENST00000306726 ANKRD20A3Q5VUR7 823 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms