RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 CRELD2Q6UXH1 353 aaPredicted RBP11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TRIML1Q8N9V2 468 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 RDH13Q8NBN7 331 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SPATA20Q8TB22 786 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CACTINQ8WUQ7 758 aaKnown RBP11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ANKRD36BP1Q96IX9 119 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 FNBP1Q96RU3 617 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PAAF1Q9BRP4 392 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ZBP1Q9H171 429 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CLSTN2Q9H4D0 955 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 MRPL17Q9NRX2 175 aaKnown RBP11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 MAN1B1Q9UKM7 699 aa11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 R3HCC1Q9Y3T6 440 aaKnown RBP11.92□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 F8W810 466 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 C2CD2LO14523 706 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PSMA7O14818 248 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 MEFVO15553 781 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CXCL14O95715 111 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TNNC2P02585 160 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SRGAP2BP0DMP2 458 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 NR2F2P24468 414 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 RPL13P26373 211 aaKnown RBP11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 LRPAP1P30533 357 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PRCPP42785 496 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TFAMQ00059 246 aaKnown RBP11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CREMQ03060 361 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 USP41Q3LFD5 358 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 COBLL1Q53SF7 1204 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SPATA1Q5VX52 437 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CEP135Q66GS9 1140 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 EP400NLQ6ZTU2 488 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CEP57Q86XR8 500 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CBWD2Q8IUF1 395 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 SLC9A9Q8IVB4 645 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ZSWIM2Q8NEG5 633 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 ZNF560Q96MR9 790 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CDCA3Q99618 268 aaPredicted RBP11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 EMILIN2Q9BXX0 1053 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 KIAA1468Q9P260 1216 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TRAF3IP3Q9Y228 551 aa11.91□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 NCK2O43639 380 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 DLATP10515 647 aaKnown RBP11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TNNI1P19237 187 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 NRIP1P48552 1158 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 GUCY2FP51841 1108 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CYP24A1Q07973 514 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 CAMK1Q14012 370 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 MYBPC2Q14324 1141 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 NFIL3Q16649 462 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 EDRF1Q3B7T1 1238 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 FAM171A1Q5VUB5 890 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 KLHL10Q6JEL2 608 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PDXDC1Q6P996 788 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 USP37Q86T82 979 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 RBM23Q86U06 439 aaKnown RBP11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 WDR49Q8IV35 697 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 EFCAB13Q8IY85 973 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 FBXL18Q96ME1 805 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TTPALQ9BTX7 342 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 VN1R3Q9BXE9 311 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 IGFLR1Q9H665 355 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 TLE6Q9H808 572 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PDE11AQ9HCR9 933 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 DPP3Q9NY33 737 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 PCDHGC5Q9Y5F6 944 aa11.9□□□□□ -0.5
CSPG4P1Y-201ENST00000306641 BICDL2A1A5D9 508 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ARHGEF37A1IGU5 675 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 SPDYE4A6NLX3 237 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CETN3O15182 167 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CLSTN1O94985 981 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 KRT19P08727 400 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 KRT13P13646 458 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PTMSP20962 102 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PAX3P23760 479 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 BRCC3P46736 316 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 NDUFV1P49821 464 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 DSG1Q02413 1049 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 LRRC63Q05C16 580 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 MORC3Q14149 939 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PSMD6Q15008 389 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PTPN14Q15678 1187 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ZBTB6Q15916 424 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 LMBRD2Q68DH5 695 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 DSTYKQ6XUX3 929 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ADGRD2Q7Z7M1 963 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 RNF168Q8IYW5 571 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ADSSL1Q8N142 457 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 C3orf58Q8NDZ4 430 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TMEM174Q8WUU8 243 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 AUTS2Q8WXX7 1259 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 RIN2Q8WYP3 895 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 DHTKD1Q96HY7 919 aaPredicted RBP11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CGRRF1Q99675 332 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 GPR62Q9BZJ7 368 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 MTMR12Q9C0I1 747 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CLDND1Q9NY35 253 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ITGA11Q9UKX5 1188 aa11.89□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CTNND2Q9UQB3 1225 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms