RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SGSM1Q2NKQ1 1148 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 ZNF699Q32M78 642 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 MARCH8Q5T0T0 291 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 RSRC2Q7L4I2 434 aaKnown RBP15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 IFNLR1Q8IU57 520 aaPredicted RBP15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 RHOT2Q8IXI1 618 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 MMS19Q96T76 1030 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 RNF216Q9NWF9 866 aaPredicted RBP15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 PCDHB2Q9Y5E7 798 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 GPR25O00155 361 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 FGFR4P22455 802 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 IRX5P78411 483 aaPredicted RBP15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 NOGQ13253 232 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 TPCN2Q8NHX9 752 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 SYT11Q9BT88 431 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 TLR10Q9BXR5 811 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 TRIM6Q9C030 488 aaPredicted RBP15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 EPC1Q9H2F5 836 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 PDZD7Q9H5P4 517 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 Q9Y3F1 56 aa15.56■□□□□ 0.08
SHCBP1-201ENST00000303383 GZMAP12544 262 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 MYL6P60660 151 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 GPC5P78333 572 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 GNASQ5JWF2 1037 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 NOCTQ9UK39 431 aaKnown RBP15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 ABLIM1O14639 778 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 FAM189A1O60320 539 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 CD58P19256 250 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 CFAP221Q4G0U5 840 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 COG1Q8WTW3 980 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 ACAP3Q96P50 834 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 OSMRQ99650 979 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 GOLPH3Q9H4A6 298 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 AMFRQ9UKV5 643 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 NENFQ9UMX5 172 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 NUB1Q9Y5A7 615 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 C17orf102A2RUQ5 167 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 KCNK3O14649 394 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 CST3P01034 146 aaPredicted RBP15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 CHRM1P11229 460 aaPredicted RBP15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 FLT3LGP49771 235 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 FBXO38Q6PIJ6 1188 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 DNAJB3Q8WWF6 145 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 KAT2BQ92831 832 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 SELENOOQ9BVL4 669 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 CCDC94Q9BW85 323 aaPredicted RBP15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 APOBEC3GQ9HC16 384 aaKnown RBP15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 OSGEPQ9NPF4 335 aa15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 NXF1Q9UBU9 619 aaKnown RBP15.55■□□□□ 0.08
SHCBP1-201ENST00000303383 SMIM35A0A1B0GVV1 85 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 B4GALT4O60513 344 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 GNA15P30679 374 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 FMO1Q01740 532 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 MEI1Q5TIA1 1274 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 SCARA5Q6ZMJ2 495 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 ZNF653Q96CK0 615 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 HHIPL1Q96JK4 782 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 ARHGAP39Q9C0H5 1083 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 TSPAN1O60635 241 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 LACTBP83111 547 aaPredicted RBP15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 TMCO3Q6UWJ1 677 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 ZNF677Q86XU0 584 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 TMEM192Q8IY95 271 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 RBBP8NLQ8NC74 664 aaPredicted RBP15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 NIF3L1Q9GZT8 377 aa15.54■□□□□ 0.08
SHCBP1-201ENST00000303383 LACTBL1A8MY62 500 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 THAP12O43422 761 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 ASS1P00966 412 aaKnown RBP15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 CHRNB2P17787 502 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 YWHAEP62258 255 aaKnown RBP15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 AMHR2Q16671 573 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 PCDHB18PQ96TA0 734 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 ISCUQ9H1K1 167 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 TMEM110-MUSTN1A8MSY1 372 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 NCANO14594 1321 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 DUSP11O75319 330 aaKnown RBP15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 FAM47CQ5HY64 1035 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 EFCAB13Q8IY85 973 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 ARHGEF26Q96DR7 871 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 RNF14Q9UBS8 474 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 UMODL1Q5DID0 1318 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 CALCAP01258 141 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 NSFP46459 744 aaKnown RBP15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 YARSP54577 528 aaKnown RBP15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 DCAF4L1Q3SXM0 396 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 ZNF667Q5HYK9 610 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 CNPY4Q8N129 248 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 PARD6BQ9BYG5 372 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 ASB7Q9H672 318 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 GABRQQ9UN88 632 aa15.53■□□□□ 0.08
SHCBP1-201ENST00000303383 KIF3CO14782 793 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 KIF4AO95239 1232 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 NPTXRO95502 500 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 RARBP10826 455 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 RNASE9P60153 205 aaKnown RBP15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 TMEM132DQ14C87 1099 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 JADE1Q6IE81 842 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 NOA1Q8NC60 698 aaKnown RBP15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 M0QZ92 97 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 TREHO43280 583 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms