RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SDCCAG3Q96C92 435 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 TTC4O95801 387 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 WEE2P0C1S8 567 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 ADORA2AP29274 412 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 ANO4Q32M45 955 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 PHLDB3Q6NSJ2 640 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 MMS22LQ6ZRQ5 1243 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 ZNF677Q86XU0 584 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 HMX1Q9NP08 348 aaPredicted RBP18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 KCNQ5Q9NR82 932 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 TRIM17Q9Y577 477 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 EVI5O60447 810 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 TRPA1O75762 1119 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 GPS1Q13098 491 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 LRGUKQ96M69 825 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 RUSC1Q9BVN2 902 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 KLK14Q9P0G3 267 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 MED24O75448 989 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 PGM5Q15124 567 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 ELOA2Q8IYF1 753 aaPredicted RBP18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 RCOR2Q8IZ40 523 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 ATP8B4Q8TF62 1192 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 CPA5Q8WXQ8 436 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 OSBPL9Q96SU4 736 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 YME1L1Q96TA2 773 aa18.69■□□□□ 0.58
CDC42EP3-201ENST00000295324 AP3B1O00203 1094 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 GBP7Q8N8V2 638 aaPredicted RBP18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 SHCBP1Q8NEM2 672 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 PARD6BQ9BYG5 372 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 STK38LQ9Y2H1 464 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 COPEO14579 308 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 PTPRAP18433 802 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 ERVK-9P63128 1117 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 ERVK-24P63145 666 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 GRB10Q13322 594 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 CFAP61Q8NHU2 1237 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 CDC26Q8NHZ8 85 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 HAUS8Q9BT25 410 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 NAGPAQ9UK23 515 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 KRT14P02533 472 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 FAM187AA6NFU0 413 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 FMR1Q06787 632 aaKnown RBP eCLIP18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 ZKSCAN8Q15776 578 aaPredicted RBP18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 SLC30A5Q8TAD4 765 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 RICTORQ6R327 1708 aa18.68■□□□□ 0.58
CDC42EP3-201ENST00000295324 TXNDC9O14530 226 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 HARS2P49590 506 aaKnown RBP18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 VGLL4Q14135 290 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 TDRD10Q5VZ19 366 aaKnown RBP18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 XPNPEP3Q9NQH7 507 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 CYP2C8P10632 490 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 GARTP22102 1010 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 ZC3H18Q86VM9 953 aaKnown RBP18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 CCDC197Q8NCU1 140 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 TRIM54Q9BYV2 358 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 OLA1Q9NTK5 396 aaKnown RBP18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 NOVA2Q9UNW9 492 aaKnown RBP18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 GOLGA8MH3BSY2 632 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 C2CD2LO14523 706 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 RAG1P15918 1043 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 NPTX2P47972 431 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 EIF3EP60228 445 aaKnown RBP18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 NSUN2Q08J23 767 aaKnown RBP eCLIP18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 NR1H3Q13133 447 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 TAF2Q6P1X5 1199 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 TTC30BQ8N4P2 665 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 GPRC5CQ9NQ84 441 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 GAKO14976 1311 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 TTC36A6NLP5 189 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 YWHAHQ04917 246 aaPredicted RBP18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 TAS2R42Q7RTR8 314 aa18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 ABI2Q9NYB9 513 aaPredicted RBP18.67■□□□□ 0.58
CDC42EP3-201ENST00000295324 AK9Q5TCS8 1911 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 VTNP04004 478 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 ALDH5A1P51649 535 aaPredicted RBP18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 TMEM132BQ14DG7 1078 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 CHADLQ6NUI6 762 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 SARS2Q9NP81 518 aaKnown RBP18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 ITIH6Q6UXX5 1313 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 PSMD3O43242 534 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 GPAT2Q6NUI2 795 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 ZC3H15Q8WU90 426 aaKnown RBP18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 FHOD1Q9Y613 1164 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 C3orf70A6NLC5 250 aaPredicted RBP18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 SLC9A1P19634 815 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 GALCP54803 685 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 RCN2Q14257 317 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 GOLGA7BQ2TAP0 167 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 GLRA4Q5JXX5 417 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 ATPAF2Q8N5M1 289 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 URODP06132 367 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 SDE2Q6IQ49 451 aa18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 CCDC137Q6PK04 289 aaKnown RBP18.66■□□□□ 0.58
CDC42EP3-201ENST00000295324 KPNA7A9QM74 516 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 ELAVL2Q12926 359 aaKnown RBP18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 DEFB115Q30KQ5 88 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 CCDC38Q502W7 563 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 NIPA1Q7RTP0 329 aa18.65■□□□□ 0.58
CDC42EP3-201ENST00000295324 CATSPERBQ9H7T0 1116 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms