RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 MCF2P10911 925 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 PIK3CAP42336 1068 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 GJA9P57773 515 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 HIC1Q14526 733 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 MFSD10Q14728 455 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 PCBP1Q15365 356 aaKnown RBP eCLIP9.82□□□□□ -0.84
PDPN-201ENST00000294489 GLE1Q53GS7 698 aaKnown RBP9.82□□□□□ -0.84
PDPN-201ENST00000294489 DHX38Q92620 1227 aaKnown RBP9.82□□□□□ -0.84
PDPN-201ENST00000294489 NLRP4Q96MN2 994 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 THAP2Q9H0W7 228 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 ISCUQ9H1K1 167 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 TAS2R14Q9NYV8 317 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 NOCTQ9UK39 431 aaKnown RBP9.82□□□□□ -0.84
PDPN-201ENST00000294489 L1RE1Q9UN81 338 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 MYH10P35580 1976 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 B4GALT5O43286 388 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 B4GALT4O60513 344 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 AKR1A1P14550 325 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 CYP11B1P15538 503 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 PSEN2P49810 448 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 IGBP1P78318 339 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 GPS2Q13227 327 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 KYAT1Q16773 422 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 TAF3Q5VWG9 929 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 CYP4F22Q6NT55 531 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 C8orf74Q6P047 294 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 NOP9Q86U38 636 aaKnown RBP9.82□□□□□ -0.84
PDPN-201ENST00000294489 SLC47A2Q86VL8 602 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 PALB2Q86YC2 1186 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 UBR7Q8N806 425 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 TATDN2Q93075 761 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 CDT1Q9H211 546 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 GOLPH3Q9H4A6 298 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 PDZD7Q9H5P4 517 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 OSGEPQ9NPF4 335 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 SMARCAL1Q9NZC9 954 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 EHD2Q9NZN4 543 aa9.82□□□□□ -0.84
PDPN-201ENST00000294489 TRIP12Q14669 1992 aaPredicted RBP9.81□□□□□ -0.84
PDPN-201ENST00000294489 A0A087WZ62 844 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 MEFVO15553 781 aaPredicted RBP9.81□□□□□ -0.84
PDPN-201ENST00000294489 ZEB2O60315 1214 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 SASH3O75995 380 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 KRT5P13647 590 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 TNFSF9P41273 254 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 GPC5P78333 572 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 PURAQ00577 322 aaKnown RBP9.81□□□□□ -0.84
PDPN-201ENST00000294489 EEF1DP3Q658K8 133 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 LMBRD2Q68DH5 695 aaPredicted RBP9.81□□□□□ -0.84
PDPN-201ENST00000294489 TRIB2Q92519 343 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 FDXACB1Q9BRP7 624 aaPredicted RBP9.81□□□□□ -0.84
PDPN-201ENST00000294489 LRRC1Q9BTT6 524 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 PI4K2AQ9BTU6 479 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 ARHGAP39Q9C0H5 1083 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 RBM12Q9NTZ6 932 aaKnown RBP9.81□□□□□ -0.84
PDPN-201ENST00000294489 GABRQQ9UN88 632 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 BUB1BO60566 1050 aaPredicted RBP9.81□□□□□ -0.84
PDPN-201ENST00000294489 TSPAN1O60635 241 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 IL18RAPO95256 599 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 HLA-DRAP01903 254 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 HARSP12081 509 aaKnown RBP9.81□□□□□ -0.84
PDPN-201ENST00000294489 PSMC4P43686 418 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 BPIFB4P59827 614 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 CAP1Q01518 475 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 CDR2Q01850 454 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 NT5DC3Q86UY8 548 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 FAXDC2Q96IV6 333 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 KATNAL1Q9BW62 490 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 CREBZFQ9NS37 354 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 SETD4Q9NVD3 440 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 CTTNBP2NLQ9P2B4 639 aa9.81□□□□□ -0.84
PDPN-201ENST00000294489 A0A1B0GUA9 196 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 GPR25O00155 361 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 MAP2K7O14733 419 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 CEP104O60308 925 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 PHACTR2O75167 634 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 CLSTN1O94985 981 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 VTNP04004 478 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 CHRNB2P17787 502 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 PLA2G4AP47712 749 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 HADHBP55084 474 aaKnown RBP9.8□□□□□ -0.84
PDPN-201ENST00000294489 TNNC1P63316 161 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 USP38Q8NB14 1042 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 OR5B17Q8NGF7 314 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 ACTRT1Q8TDG2 376 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 DDX1Q92499 740 aaKnown RBP9.8□□□□□ -0.84
PDPN-201ENST00000294489 LENG1Q96BZ8 264 aaPredicted RBP9.8□□□□□ -0.84
PDPN-201ENST00000294489 ARHGEF26Q96DR7 871 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 IMPG2Q9BZV3 1241 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 AP5M1Q9H0R1 490 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 ACBD3Q9H3P7 528 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 AKT3Q9Y243 479 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 STXBP5LQ9Y2K9 1186 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 CITO14578 2027 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 INO80B-WBP1J3KQ70 363 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 MMEP08473 750 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 ACO1P21399 889 aaKnown RBP9.8□□□□□ -0.84
PDPN-201ENST00000294489 FMO1Q01740 532 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 FSCN1Q16658 493 aaKnown RBP9.8□□□□□ -0.84
PDPN-201ENST00000294489 CCNI2Q6ZMN8 369 aaPredicted RBP9.8□□□□□ -0.84
PDPN-201ENST00000294489 CXorf38Q8TB03 319 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms