RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 CRISPLD1Q9H336 500 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 ARHGEF3Q9NR81 526 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 SLC2A4RGQ9NR83 387 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.68□□□□□ -0.86
TFF1-201ENST00000291527 ARHGAP28Q9P2N2 729 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 TUBGCP4Q9UGJ1 667 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 TNFSF13BQ9Y275 285 aa9.68□□□□□ -0.86
TFF1-201ENST00000291527 TMEM189-UBE2V1I3L0A0 370 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 PODXLO00592 558 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 PPEF2O14830 753 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 RHOP08100 348 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 TNFSF9P41273 254 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 GRM5P41594 1212 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 STARD6P59095 220 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 ROR1Q01973 937 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 GRIN1Q05586 938 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 MRPL58Q14197 206 aaKnown RBP9.67□□□□□ -0.86
TFF1-201ENST00000291527 BECN1Q14457 450 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 SAFBQ15424 915 aaKnown RBP eCLIP9.67□□□□□ -0.86
TFF1-201ENST00000291527 ZRSR1Q15695 479 aaKnown RBP9.67□□□□□ -0.86
TFF1-201ENST00000291527 SLC10A6Q3KNW5 377 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 DCAF4L1Q3SXM0 396 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 SLC44A4Q53GD3 710 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 PRSS36Q5K4E3 855 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 VARS2Q5ST30 1063 aaKnown RBP9.67□□□□□ -0.86
TFF1-201ENST00000291527 PHLDB3Q6NSJ2 640 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 TSSK4Q6SA08 328 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 PJA1Q8NG27 643 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 IFT74Q96LB3 600 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 LLPHQ9BRT6 129 aaKnown RBP9.67□□□□□ -0.86
TFF1-201ENST00000291527 IRF2BPLQ9H1B7 796 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.67□□□□□ -0.86
TFF1-201ENST00000291527 SIT1Q9Y3P8 196 aa9.67□□□□□ -0.86
TFF1-201ENST00000291527 TIMM13Q9Y5L4 95 aaPredicted RBP9.67□□□□□ -0.86
TFF1-201ENST00000291527 TSC2P49815 1807 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 ABLIM3O94929 683 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 C1RP00736 705 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 HNRNPA1P09651 372 aaKnown RBP eCLIP9.66□□□□□ -0.86
TFF1-201ENST00000291527 OR4Q2P0C623 313 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 TARSP26639 723 aaKnown RBP9.66□□□□□ -0.86
TFF1-201ENST00000291527 RBM25P49756 843 aaKnown RBP9.66□□□□□ -0.86
TFF1-201ENST00000291527 GRM2Q14416 872 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 PDIA5Q14554 519 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 ZNF568Q3ZCX4 644 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 PABPC1LQ4VXU2 614 aaKnown RBP9.66□□□□□ -0.86
TFF1-201ENST00000291527 WDR44Q5JSH3 913 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 LIN9Q5TKA1 542 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 RNF19BQ6ZMZ0 732 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 C1orf210Q8IVY1 113 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 ZNF687Q8N1G0 1237 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 TMEM161BQ8NDZ6 487 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 ERMNQ8TAM6 284 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 KIFAP3Q92845 792 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 RMDN1Q96DB5 314 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 RSPRY1Q96DX4 576 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 TMEM209Q96SK2 561 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 ADPGKQ9BRR6 497 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 DDX23Q9BUQ8 820 aaKnown RBP9.66□□□□□ -0.86
TFF1-201ENST00000291527 TMEM134Q9H6X4 195 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 KMT5AQ9NQR1 393 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 CEP72Q9P209 647 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 FBXL5Q9UKA1 691 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 BACE2Q9Y5Z0 518 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 TCHHQ07283 1943 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 DENND4CQ5VZ89 1909 aa9.66□□□□□ -0.86
TFF1-201ENST00000291527 PHLPP2Q6ZVD8 1323 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 FAM170BA6NMN3 283 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 TISP43B9A030 160 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 SOAT2O75908 522 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 CXCL8P10145 99 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 MAPTP10636 758 aaKnown RBP9.65□□□□□ -0.86
TFF1-201ENST00000291527 KCNE1P15382 129 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 HOXA9P31269 272 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 VIPR2P41587 438 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 EFNA5P52803 228 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 SLC12A3P55017 1021 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 UBXN2BQ14CS0 331 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 PPP2R5AQ15172 486 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 MLF2Q15773 248 aaPredicted RBP9.65□□□□□ -0.86
TFF1-201ENST00000291527 FAM78AQ5JUQ0 283 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 SLC8B1Q6J4K2 584 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 KIAA2013Q8IYS2 634 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 TTC9BQ8N6N2 239 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 FAM184AQ8NB25 1140 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 SUMF1Q8NBK3 374 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 NXPE3Q969Y0 559 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 FAM84AQ96KN4 292 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 TBC1D32Q96NH3 1257 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 LRRC3BQ96PB8 259 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 CORO1BQ9BR76 489 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 HEBP1Q9NRV9 189 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 CNTN3Q9P232 1028 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 DPP7Q9UHL4 492 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 DNM3Q9UQ16 869 aa9.65□□□□□ -0.86
TFF1-201ENST00000291527 RALGAPA1Q6GYQ0 2036 aa9.65□□□□□ -0.87
TFF1-201ENST00000291527 ZNF638Q14966 1978 aaKnown RBP9.64□□□□□ -0.87
TFF1-201ENST00000291527 KANSL1LA0AUZ9 987 aa9.64□□□□□ -0.87
TFF1-201ENST00000291527 ARHGEF37A1IGU5 675 aa9.64□□□□□ -0.87
TFF1-201ENST00000291527 FAM189A1O60320 539 aa9.64□□□□□ -0.87
TFF1-201ENST00000291527 MCF2P10911 925 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms