RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 COL11A1P12107 1806 aaPredicted RBP11.2□□□□□ -0.62
ERCC3-201ENST00000285398 PDHXO00330 501 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 MARCH6O60337 910 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 SORBS3O60504 671 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 PHF2O75151 1096 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 PTDSS1P48651 473 aaKnown RBP11.2□□□□□ -0.62
ERCC3-201ENST00000285398 TUBP50607 506 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 CNTN2Q02246 1040 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 FSTL1Q12841 308 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 WASHC2DQ5SRD0 308 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 SPRYD7Q5W111 196 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 LBX2Q6XYB7 198 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 TRMT10CQ7L0Y3 403 aaKnown RBP11.2□□□□□ -0.62
ERCC3-201ENST00000285398 ADAT2Q7Z6V5 191 aaKnown RBP11.2□□□□□ -0.62
ERCC3-201ENST00000285398 NELFCDQ8IXH7 590 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 SLC17A8Q8NDX2 589 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 CFAP61Q8NHU2 1237 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 DLGAP2Q9P1A6 1054 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 RBPJLQ9UBG7 517 aa11.2□□□□□ -0.62
ERCC3-201ENST00000285398 CETN3O15182 167 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 DDX3YO15523 660 aaKnown RBP11.19□□□□□ -0.62
ERCC3-201ENST00000285398 GFPT2O94808 682 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 EYA4O95677 639 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 MYCLP12524 364 aaPredicted RBP11.19□□□□□ -0.62
ERCC3-201ENST00000285398 STX2P32856 288 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 MTFR1Q15390 333 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 EXOC3L4Q17RC7 722 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 EDRF1Q3B7T1 1238 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 LRRC23Q53EV4 343 aaPredicted RBP11.19□□□□□ -0.62
ERCC3-201ENST00000285398 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 ARHGEF18Q6ZSZ5 1173 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 CRYGNQ8WXF5 182 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 RFFLQ8WZ73 363 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 KIFAP3Q92845 792 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 MAGEB18Q96M61 343 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 PIDD1Q9HB75 910 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 ERVK-5Q9HDB9 667 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 NCANO14594 1321 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 PIK3CDO00329 1044 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 AFPP02771 609 aaKnown RBP11.19□□□□□ -0.62
ERCC3-201ENST00000285398 PGK2P07205 417 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 SLC9A1P19634 815 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 SREBF1P36956 1147 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 RPL21P46778 160 aaKnown RBP11.19□□□□□ -0.62
ERCC3-201ENST00000285398 AP3B2Q13367 1082 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 ECM1Q16610 540 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 DCAF12L1Q5VU92 463 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 SDCCAG8Q86SQ7 713 aaPredicted RBP11.19□□□□□ -0.62
ERCC3-201ENST00000285398 ECHDC2Q86YB7 292 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 ANKRD42Q8N9B4 389 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 FAM13CQ8NE31 585 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 FAM81AQ8TBF8 368 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 SCFD1Q8WVM8 642 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 LENG9Q96B70 501 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 RMDN3Q96TC7 470 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 DDX23Q9BUQ8 820 aaKnown RBP11.19□□□□□ -0.62
ERCC3-201ENST00000285398 PORCNQ9H237 461 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 DCLRE1BQ9H816 532 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 STOML1Q9UBI4 398 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 ARMCX3Q9UH62 379 aaPredicted RBP11.19□□□□□ -0.62
ERCC3-201ENST00000285398 PCYOX1Q9UHG3 505 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 SYNGAP1Q96PV0 1343 aa11.19□□□□□ -0.62
ERCC3-201ENST00000285398 POTEFA5A3E0 1075 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 DDX3XO00571 662 aaKnown RBP eCLIP11.18□□□□□ -0.624e-6■■■□□ 15.1
ERCC3-201ENST00000285398 HGSO14964 777 aaPredicted RBP11.18□□□□□ -0.62
ERCC3-201ENST00000285398 CNMDO75829 334 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 PON1P27169 355 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 COPB2P35606 906 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 RFC5P40937 340 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 PTGIRP43119 386 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 GALCP54803 685 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 POLE2P56282 527 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 JAM2P57087 298 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 HTRA3P83110 453 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 MGAT5Q09328 741 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 VSTM1Q6UX27 236 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 OTUD6AQ7L8S5 288 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 TRMT1LQ7Z2T5 733 aaKnown RBP11.18□□□□□ -0.62
ERCC3-201ENST00000285398 CCDC65Q8IXS2 484 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 SLC35G2Q8TBE7 412 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 U2AF1L4Q8WU68 220 aaKnown RBP11.18□□□□□ -0.62
ERCC3-201ENST00000285398 CTNNBL1Q8WYA6 563 aaPredicted RBP11.18□□□□□ -0.62
ERCC3-201ENST00000285398 RBM41Q96IZ5 413 aaKnown RBP11.18□□□□□ -0.62
ERCC3-201ENST00000285398 FGD4Q96M96 766 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 SPATC1LQ9H0A9 340 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 TBC1D7Q9P0N9 293 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 LRCH1Q9Y2L9 728 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 DDX39AO00148 427 aaKnown RBP11.18□□□□□ -0.62
ERCC3-201ENST00000285398 CHMP2AO43633 222 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 MYBL1P10243 752 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 SKIP12755 728 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 HSD17B4P51659 736 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 ZRSR2Q15696 482 aaKnown RBP11.18□□□□□ -0.62
ERCC3-201ENST00000285398 LONRF1Q17RB8 773 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 OR52E8Q6IFG1 317 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 FASTKD5Q7L8L6 764 aaKnown RBP11.18□□□□□ -0.62
ERCC3-201ENST00000285398 ANKRD35Q8N283 1001 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 GDAP1Q8TB36 358 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 C18orf8Q96DM3 657 aa11.18□□□□□ -0.62
ERCC3-201ENST00000285398 LRRC37BQ96QE4 947 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms