RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 AKT3Q9Y243 479 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 UMODL1Q5DID0 1318 aa10.27□□□□□ -0.76
TRIM55-201ENST00000276573 GPR25O00155 361 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 IGF2BP3O00425 579 aaKnown RBP eCLIP10.27□□□□□ -0.77
TRIM55-201ENST00000276573 ADCY6O43306 1168 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 MYL6P60660 151 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 MRPS25P82663 173 aaKnown RBP10.27□□□□□ -0.77
TRIM55-201ENST00000276573 SLC7A5Q01650 507 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 AMHR2Q16671 573 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 PRAMEF19Q5SWL8 479 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 MARCH8Q5T0T0 291 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 C11orf63Q6NUN7 778 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 C8orf74Q6P047 294 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 UBR7Q8N806 425 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 RPS6KC1Q96S38 1066 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 HINFPQ9BQA5 517 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 UBXN6Q9BZV1 441 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 IMPG2Q9BZV3 1241 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 MTMR12Q9C0I1 747 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 ZCCHC17Q9NP64 241 aaKnown RBP10.27□□□□□ -0.77
TRIM55-201ENST00000276573 TTC7AQ9ULT0 858 aaPredicted RBP10.27□□□□□ -0.77
TRIM55-201ENST00000276573 EVPLQ92817 2033 aa10.27□□□□□ -0.77
TRIM55-201ENST00000276573 PGRMC1O00264 195 aaKnown RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 DYNC1LI2O43237 492 aaPredicted RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 ZEB2O60315 1214 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 CSDE1O75534 798 aaKnown RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 IL18RAPO95256 599 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 VTNP04004 478 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 CYP1A1P04798 512 aaPredicted RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 MCF2P10911 925 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 OSTNP61366 133 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 TNNC1P63316 161 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 TFAMQ00059 246 aaKnown RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 PPFIA1Q13136 1202 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 TRPC3Q13507 836 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 IRF5Q13568 498 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 MESDQ14696 234 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 GRIK4Q16099 956 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 CHADLQ6NUI6 762 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 TMEM270Q6UE05 265 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 KIAA0319LQ8IZA0 1049 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 MCOLN2Q8IZK6 566 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 CEP120Q8N960 986 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 RBBP8NLQ8NC74 664 aaPredicted RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 ZNF653Q96CK0 615 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 KRT12Q99456 494 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 NUP85Q9BW27 656 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 RPF1Q9H9Y2 349 aaKnown RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 STIM2Q9P246 746 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 UVRAGQ9P2Y5 699 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 CHORDC1Q9UHD1 332 aaPredicted RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 RRN3P2A6NIE6 340 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 A6NJR5 290 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 MIF4GDA9UHW6 222 aaKnown RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 ATMINO43313 823 aaPredicted RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 TNNC2P02585 160 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 MYBL2P10244 700 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 POU5F1Q01860 360 aaKnown RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 CASP8Q14790 479 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 TAF1CQ15572 869 aaPredicted RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 SMYD5Q6GMV2 418 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 C17orf99Q6UX52 265 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 TRIM72Q6ZMU5 477 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 EFCAB13Q8IY85 973 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 TMEM192Q8IY95 271 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 ZNF564Q8TBZ8 553 aaPredicted RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 CPA5Q8WXQ8 436 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 USP6NLQ92738 828 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 CYFIP2Q96F07 1278 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 ANKRD36BP1Q96IX9 119 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 PPP1R16BQ96T49 567 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 CARD9Q9H257 536 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 PDZD7Q9H5P4 517 aa10.26□□□□□ -0.77
TRIM55-201ENST00000276573 CNOT8Q9UFF9 292 aaKnown RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 GNEQ9Y223 722 aaKnown RBP10.26□□□□□ -0.77
TRIM55-201ENST00000276573 TMEM110-MUSTN1A8MSY1 372 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 LACTBL1A8MY62 500 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 CCDC188H7C350 402 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 ECM2O94769 699 aaPredicted RBP10.25□□□□□ -0.77
TRIM55-201ENST00000276573 GLI1P08151 1106 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 TMEM191BP0C7N4 346 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 ZNF865P0CJ78 1059 aaPredicted RBP10.25□□□□□ -0.77
TRIM55-201ENST00000276573 STAG3L1P0CL83 205 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 ARF4P18085 180 aaPredicted RBP10.25□□□□□ -0.77
TRIM55-201ENST00000276573 COMTP21964 271 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 TNFRSF8P28908 595 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 GNA15P30679 374 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 ZNF132P52740 706 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 SMC1AQ14683 1233 aaKnown RBP10.25□□□□□ -0.77
TRIM55-201ENST00000276573 DCAF12L1Q5VU92 463 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 KLHL7Q8IXQ5 586 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 IFT20Q8IY31 132 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 CPB2Q96IY4 423 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 XYLT2Q9H1B5 865 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 WNT8AQ9H1J5 351 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 AVENQ9NQS1 362 aaPredicted RBP10.25□□□□□ -0.77
TRIM55-201ENST00000276573 GDF3Q9NR23 364 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 SETD4Q9NVD3 440 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 FLRT1Q9NZU1 646 aa10.25□□□□□ -0.77
TRIM55-201ENST00000276573 NOC2LQ9Y3T9 749 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms