RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 FAM122AQ96E09 287 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 UROC1Q96N76 676 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 ST6GALNAC4Q9H4F1 302 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 SCN1AP35498 2009 aa15.75■□□□□ 0.11
HMGN3-201ENST00000275036 NOTCH4Q99466 2003 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 TTC26A0AVF1 554 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 ANKRD63C9JTQ0 380 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 PODXLO00592 558 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 PPP1R37O75864 691 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 YEATS4O95619 227 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 TKTP29401 623 aaKnown RBP15.74■□□□□ 0.11
HMGN3-201ENST00000275036 STAT6P42226 847 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 SPAG1Q07617 926 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 E2F4Q16254 413 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 AXDND1Q5T1B0 1012 aaPredicted RBP15.74■□□□□ 0.11
HMGN3-201ENST00000275036 IER5LQ5T953 404 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 SHC4Q6S5L8 630 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.74■□□□□ 0.11
HMGN3-201ENST00000275036 CCDC73Q6ZRK6 1079 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 ZNF720Q7Z2F6 126 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 HDAC7Q8WUI4 952 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 PBXIP1Q96AQ6 731 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 STRA6Q9BX79 667 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 RHOBTB2Q9BYZ6 727 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 WDR6Q9NNW5 1121 aaKnown RBP15.74■□□□□ 0.11
HMGN3-201ENST00000275036 SLC38A7Q9NVC3 462 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 TUBGCP4Q9UGJ1 667 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 FBXW11Q9UKB1 542 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 SORCS3Q9UPU3 1222 aa15.74■□□□□ 0.11
HMGN3-201ENST00000275036 ZDBF2Q9HCK1 2354 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 CLUHO75153 1309 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 A0A0B4J269 797 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 C1RP00736 705 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 CLTAP09496 248 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 SCP2P22307 547 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 VCPP55072 806 aaKnown RBP15.73■□□□□ 0.11
HMGN3-201ENST00000275036 KCNA1Q09470 495 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 ELAVL2Q12926 359 aaKnown RBP15.73■□□□□ 0.11
HMGN3-201ENST00000275036 MTMR3Q13615 1198 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 ENOX2Q16206 610 aaKnown RBP15.73■□□□□ 0.11
HMGN3-201ENST00000275036 SMG7Q92540 1137 aaKnown RBP15.73■□□□□ 0.11
HMGN3-201ENST00000275036 STAMQ92783 540 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 DDX27Q96GQ7 796 aaKnown RBP15.73■□□□□ 0.11
HMGN3-201ENST00000275036 MFSD14AQ96MC6 490 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 FGFBP2Q9BYJ0 223 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 PLEKHA4Q9H4M7 779 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 TBC1D7Q9P0N9 293 aa15.73■□□□□ 0.11
HMGN3-201ENST00000275036 FRMD3A2A2Y4 597 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 LACTBL1A8MY62 500 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 OGTO15294 1046 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 CUTAO60888 179 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 ZMYND10O75800 440 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 PDIA4P13667 645 aaKnown RBP15.72■□□□□ 0.11
HMGN3-201ENST00000275036 CASP5P51878 434 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 CREMQ03060 361 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 ZBTB6Q15916 424 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 FBXL6Q8N531 539 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 PRSS33Q8NF86 280 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 MYADMQ96S97 322 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 MSTO1Q9BUK6 570 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 PRKD2Q9BZL6 878 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 ZDHHC7Q9NXF8 308 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 MTRRQ9UBK8 725 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 ZDHHC9Q9Y397 364 aa15.72■□□□□ 0.11
HMGN3-201ENST00000275036 ADRB2P07550 413 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 GAP43P17677 238 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 OR1D2P34982 312 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 GUCY2FP51841 1108 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 NTHL1P78549 312 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 DNM1Q05193 864 aaKnown RBP15.71■□□□□ 0.11
HMGN3-201ENST00000275036 OTOP3Q7RTS5 596 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 PLCD3Q8N3E9 789 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 RSAD2Q8WXG1 361 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 KIF12Q96FN5 646 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 CHAMP1Q96JM3 812 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 MRPL44Q9H9J2 332 aaKnown RBP15.71■□□□□ 0.11
HMGN3-201ENST00000275036 PLEKHA5Q9HAU0 1116 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 KCNK12Q9HB15 430 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 SEL1LQ9UBV2 794 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 DPP7Q9UHL4 492 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 CPSF3Q9UKF6 684 aaKnown RBP15.71■□□□□ 0.11
HMGN3-201ENST00000275036 PCDHA7Q9UN72 937 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 CDY1Q9Y6F8 540 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 STYXL1Q9Y6J8 313 aa15.71■□□□□ 0.11
HMGN3-201ENST00000275036 TSC2P49815 1807 aa15.71■□□□□ 0.1
HMGN3-201ENST00000275036 C8AP07357 584 aa15.7■□□□□ 0.1
HMGN3-201ENST00000275036 IDEP14735 1019 aa15.7■□□□□ 0.1
HMGN3-201ENST00000275036 ADSSP30520 456 aa15.7■□□□□ 0.1
HMGN3-201ENST00000275036 RPL9P32969 192 aaKnown RBP15.7■□□□□ 0.1
HMGN3-201ENST00000275036 ABCD1P33897 745 aa15.7■□□□□ 0.1
HMGN3-201ENST00000275036 PPP2R3AQ06190 1150 aa15.7■□□□□ 0.1
HMGN3-201ENST00000275036 RAB33AQ14088 237 aa15.7■□□□□ 0.1
HMGN3-201ENST00000275036 CYP26C1Q6V0L0 522 aa15.7■□□□□ 0.1
HMGN3-201ENST00000275036 UBALD2Q8IYN6 164 aa15.7■□□□□ 0.1
HMGN3-201ENST00000275036 ST13P5Q8NFI4 369 aaPredicted RBP15.7■□□□□ 0.1
HMGN3-201ENST00000275036 DHX58Q96C10 678 aa15.7■□□□□ 0.1
HMGN3-201ENST00000275036 ACSF2Q96CM8 615 aaPredicted RBP15.7■□□□□ 0.1
HMGN3-201ENST00000275036 HVCN1Q96D96 273 aa15.7■□□□□ 0.1
HMGN3-201ENST00000275036 RPF1Q9H9Y2 349 aaKnown RBP15.7■□□□□ 0.1
HMGN3-201ENST00000275036 OLFML3Q9NRN5 406 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms