RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 LRRC36Q1X8D7 754 aa16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 ARL6IP4Q66PJ3 421 aaKnown RBP16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 GRAMD1AQ96CP6 724 aa16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 PTTG2Q9NZH5 202 aa16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 SPAG7O75391 227 aa16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 BCRP11274 1271 aa16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 FGFR1P11362 822 aa16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 DTHD1Q6ZMT9 781 aa16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 RBM44Q6ZP01 1051 aaKnown RBP16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 POP1Q99575 1024 aaKnown RBP16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 POLR3CQ9BUI4 534 aaPredicted RBP16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 EDEM3Q9BZQ6 932 aa16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 AAASQ9NRG9 546 aa16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 UBAP1Q9NZ09 502 aa16.68■□□□□ 0.26
CTDSP1-201ENST00000273062 MAP3K10Q02779 954 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 GABPAQ06546 454 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 TMEM259Q4ZIN3 620 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 CDC42EP5Q6NZY7 148 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 RAPH1Q70E73 1250 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 LRRC43Q8N309 656 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 ALG3Q92685 438 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 BTBD10Q9BSF8 475 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 CCDC28BQ9BUN5 200 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 TMEM260Q9NX78 707 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 HEMK1Q9Y5R4 338 aaPredicted RBP16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 STRN3Q13033 797 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 ZNF568Q3ZCX4 644 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 ARHGEF18Q6ZSZ5 1173 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 NLRP9Q7RTR0 991 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 IRF2BP2Q7Z5L9 587 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 CROCCP2Q86T23 111 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 RBM46Q8TBY0 533 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 CDK5RAP3Q96JB5 506 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 SPZ1Q9BXG8 430 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 MTMR4Q9NYA4 1195 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 NKIRAS1Q9NYS0 192 aa16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 MTRF1LQ9UGC7 380 aaKnown RBP16.67■□□□□ 0.26
CTDSP1-201ENST00000273062 SMCO2A6NFE2 343 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 G3V3G9 751 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 CHKAP35790 457 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 DCAF8Q5TAQ9 597 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 APOBEC3HQ6NTF7 200 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 DIS3LQ8TF46 1054 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 SERPINB12Q96P63 405 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 TTC1Q99614 292 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 STK33Q9BYT3 514 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 IL1RAPL1Q9NZN1 696 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 CFAP69A5D8W1 941 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 FAM187AA6NFU0 413 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 NFKBIAP25963 317 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 CHRNA5P30532 468 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 HALP42357 657 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 GRAMD4Q6IC98 578 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 KLHDC10Q6PID8 442 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 DYMQ7RTS9 669 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 DEPTORQ8TB45 409 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 U2AF1L4Q8WU68 220 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 PWWP2AQ96N64 755 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 ROPN1BQ9BZX4 212 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 ROPN1Q9HAT0 212 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 DCTN4Q9UJW0 460 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 IGSF9BQ9UPX0 1349 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 CCDC160A6NGH7 325 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 TP73O15350 636 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 GYG2O15488 501 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 ATMINO43313 823 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 ANPEPP15144 967 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 PORP16435 677 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 RGS2P41220 211 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 DRG2P55039 364 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 TCP10Q12799 353 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 CTTNQ14247 550 aaKnown RBP16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 LETM2Q2VYF4 491 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 MAP7D1Q3KQU3 841 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 PRELID2Q8N945 189 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 DAGLBQ8NCG7 672 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 MCUR1Q96AQ8 359 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 COA7Q96BR5 231 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 PPP1R14BQ96C90 147 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 SMC6Q96SB8 1091 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 NPHS2Q9NP85 383 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 KANSL3Q9P2N6 904 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 PPM1HQ9ULR3 514 aa16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 TTC7AQ9ULT0 858 aaPredicted RBP16.66■□□□□ 0.26
CTDSP1-201ENST00000273062 FOCADQ5VW36 1801 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 NRXN2Q9P2S2 1712 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 BAG2O95816 211 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 CHRNB2P17787 502 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 KCNJ1P48048 391 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 RXRGP48443 463 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 CYLC2Q14093 348 aaPredicted RBP16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 PPP2R3CQ969Q6 453 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 PTCD3Q96EY7 689 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 MASTLQ96GX5 879 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 GANQ9H2C0 597 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 AMFRQ9UKV5 643 aa16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 CCNT1O60563 726 aaKnown RBP16.65■□□□□ 0.26
CTDSP1-201ENST00000273062 CCDC22O60826 627 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms