RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 FRMD4BQ9Y2L6 1034 aa26.65■■□□□ 1.86
SSBP4-201ENST00000270061 LRRIQ4A6NIV6 560 aa26.64■■□□□ 1.86
SSBP4-201ENST00000270061 AXLP30530 894 aa26.64■■□□□ 1.86
SSBP4-201ENST00000270061 MBTD1Q05BQ5 628 aa26.64■■□□□ 1.86
SSBP4-201ENST00000270061 COLGALT1Q8NBJ5 622 aa26.64■■□□□ 1.86
SSBP4-201ENST00000270061 SPPL3Q8TCT6 385 aa26.64■■□□□ 1.86
SSBP4-201ENST00000270061 LPPQ93052 612 aa26.64■■□□□ 1.86
SSBP4-201ENST00000270061 COL25A1Q9BXS0 654 aaPredicted RBP26.64■■□□□ 1.86
SSBP4-201ENST00000270061 ARHGAP28Q9P2N2 729 aa26.64■■□□□ 1.86
SSBP4-201ENST00000270061 PCDHB2Q9Y5E7 798 aa26.64■■□□□ 1.86
SSBP4-201ENST00000270061 TSPAN1O60635 241 aa26.63■■□□□ 1.85
SSBP4-201ENST00000270061 CSPG5O95196 566 aa26.63■■□□□ 1.85
SSBP4-201ENST00000270061 AFPP02771 609 aaKnown RBP26.63■■□□□ 1.85
SSBP4-201ENST00000270061 PPP2R5AQ15172 486 aa26.63■■□□□ 1.85
SSBP4-201ENST00000270061 TCEAL5Q5H9L2 206 aa26.63■■□□□ 1.85
SSBP4-201ENST00000270061 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.63■■□□□ 1.85
SSBP4-201ENST00000270061 RSPH1Q8WYR4 309 aa26.63■■□□□ 1.85
SSBP4-201ENST00000270061 PGBD4Q96DM1 585 aa26.63■■□□□ 1.85
SSBP4-201ENST00000270061 MRPL9Q9BYD2 267 aaKnown RBP26.63■■□□□ 1.85
SSBP4-201ENST00000270061 MAPK13O15264 365 aa26.63■■□□□ 1.85
SSBP4-201ENST00000270061 NOTUMQ6P988 496 aa26.63■■□□□ 1.85
SSBP4-201ENST00000270061 THNSL1Q8IYQ7 743 aa26.63■■□□□ 1.85
SSBP4-201ENST00000270061 ZNF397Q8NF99 534 aaPredicted RBP26.63■■□□□ 1.85
SSBP4-201ENST00000270061 POF1BQ8WVV4 589 aa26.63■■□□□ 1.85
SSBP4-201ENST00000270061 SLC35C1Q96A29 364 aa26.63■■□□□ 1.85
SSBP4-201ENST00000270061 USP27XA6NNY8 438 aa26.62■■□□□ 1.85
SSBP4-201ENST00000270061 NAMPTP43490 491 aa26.62■■□□□ 1.85
SSBP4-201ENST00000270061 CAMK1Q14012 370 aa26.62■■□□□ 1.85
SSBP4-201ENST00000270061 TSR1Q2NL82 804 aaKnown RBP26.62■■□□□ 1.85
SSBP4-201ENST00000270061 GLB1LQ6UWU2 654 aa26.62■■□□□ 1.85
SSBP4-201ENST00000270061 CYP26C1Q6V0L0 522 aa26.62■■□□□ 1.85
SSBP4-201ENST00000270061 MMRN2Q9H8L6 949 aa26.62■■□□□ 1.85
SSBP4-201ENST00000270061 FGF18O76093 207 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 DNAJB1P25685 340 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 CYP2J2P51589 502 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 MCCD1P59942 119 aaPredicted RBP26.61■■□□□ 1.85
SSBP4-201ENST00000270061 CPB2Q96IY4 423 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 GTPBP10A4D1E9 387 aaKnown RBP26.61■■□□□ 1.85
SSBP4-201ENST00000270061 MEIS3P2A8K0S8 358 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 EXOC3O60645 756 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 UBE3AQ05086 875 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 MEA1Q16626 185 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 AMHR2Q16671 573 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 UBXN11Q5T124 520 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 KCNT2Q6UVM3 1135 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 ZBTB8OSQ8IWT0 167 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 NEK11Q8NG66 645 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 KIFC3Q9BVG8 833 aa26.61■■□□□ 1.85
SSBP4-201ENST00000270061 UBE2ZQ9H832 354 aaPredicted RBP26.61■■□□□ 1.85
SSBP4-201ENST00000270061 ZSCAN12O43309 604 aa26.6■■□□□ 1.85
SSBP4-201ENST00000270061 HNRNPH3P31942 346 aaKnown RBP26.6■■□□□ 1.85
SSBP4-201ENST00000270061 CDCA2Q69YH5 1023 aaPredicted RBP26.6■■□□□ 1.85
SSBP4-201ENST00000270061 MRPL10Q7Z7H8 261 aaKnown RBP26.6■■□□□ 1.85
SSBP4-201ENST00000270061 ZNF558Q96NG5 402 aa26.6■■□□□ 1.85
SSBP4-201ENST00000270061 TRMT1Q9NXH9 659 aaKnown RBP26.6■■□□□ 1.85
SSBP4-201ENST00000270061 SOWAHDA6NJG2 315 aa26.59■■□□□ 1.85
SSBP4-201ENST00000270061 ARF4P18085 180 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-201ENST00000270061 NYAP1Q6ZVC0 841 aa26.59■■□□□ 1.85
SSBP4-201ENST00000270061 XXYLT1Q8NBI6 393 aa26.59■■□□□ 1.85
SSBP4-201ENST00000270061 PPP1R13BQ96KQ4 1090 aa26.59■■□□□ 1.85
SSBP4-201ENST00000270061 C2orf40Q9H1Z8 148 aa26.59■■□□□ 1.85
SSBP4-201ENST00000270061 FAM207AQ9NSI2 230 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-201ENST00000270061 HSPBP1Q9NZL4 362 aa26.59■■□□□ 1.85
SSBP4-201ENST00000270061 INPP5FQ9Y2H2 1132 aa26.59■■□□□ 1.85
SSBP4-201ENST00000270061 TDRD15B5MCY1 1934 aaKnown RBP26.59■■□□□ 1.85
SSBP4-201ENST00000270061 PPM1AP35813 382 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 CDK17Q00537 523 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 NOMO2Q5JPE7 1267 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 RAD9BQ6WBX8 426 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 AGMOQ6ZNB7 445 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 PPP2R3CQ969Q6 453 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 CBWD1Q9BRT8 395 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 PRMT7Q9NVM4 692 aaPredicted RBP26.58■■□□□ 1.85
SSBP4-201ENST00000270061 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.58■■□□□ 1.85
SSBP4-201ENST00000270061 EPHB6O15197 1021 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 B4GALT5O43286 388 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 PBX3P40426 434 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 KCNQ1P51787 676 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 DCAF17Q5H9S7 520 aaPredicted RBP26.58■■□□□ 1.85
SSBP4-201ENST00000270061 WDR59Q6PJI9 974 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 INTS8Q75QN2 995 aaKnown RBP26.58■■□□□ 1.85
SSBP4-201ENST00000270061 TAS1R3Q7RTX0 852 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 DEPTORQ8TB45 409 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 PRIMPOLQ96LW4 560 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 EIF2AQ9BY44 585 aaKnown RBP26.58■■□□□ 1.85
SSBP4-201ENST00000270061 TRIM6Q9C030 488 aaPredicted RBP26.58■■□□□ 1.85
SSBP4-201ENST00000270061 RSAD1Q9HA92 442 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 PLCB1Q9NQ66 1216 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 CEP72Q9P209 647 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 PPP2R2CQ9Y2T4 447 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 CNTNAP2Q9UHC6 1331 aa26.58■■□□□ 1.85
SSBP4-201ENST00000270061 TISP43B9A030 160 aa26.57■■□□□ 1.84
SSBP4-201ENST00000270061 NOL4O94818 638 aa26.57■■□□□ 1.84
SSBP4-201ENST00000270061 ALDH7A1P49419 539 aaKnown RBP26.57■■□□□ 1.84
SSBP4-201ENST00000270061 BFSP1Q12934 665 aa26.57■■□□□ 1.84
SSBP4-201ENST00000270061 TCERG1LQ5VWI1 586 aa26.57■■□□□ 1.84
SSBP4-201ENST00000270061 PABPC5Q96DU9 382 aaKnown RBP26.57■■□□□ 1.84
SSBP4-201ENST00000270061 TMEM134Q9H6X4 195 aa26.57■■□□□ 1.84
SSBP4-201ENST00000270061 TLR9Q9NR96 1032 aa26.57■■□□□ 1.84
SSBP4-201ENST00000270061 TBC1D13Q9NVG8 400 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms